Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_13284.1_32309
Locus scaffold13284.1 : 36724 ... 46254 : -
To GenomeBrowser scaffold13284.1:36724..46254
Genes list of scaffold scaffold13284.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_13284.1_32309.t1 1 1 EGF_CA 1 39 2.1e-10 40.4 1.9e-13 2.8e-10 40.0
pfu_aug1.0_13284.1_32309.t1 1 1 EGF_3 4 39 6.6e-11 41.9 5.5e-14 8.2e-11 41.6
pfu_aug1.0_13284.1_32309.t1 1 1 EGF 4 35 3.6e-06 26.8 2.4e-09 3.6e-06 26.8

Transcript
Transcript IDpfu_aug1.0_13284.1_32309.t1
Definition-
>pfu_aug1.0_13284.1_32309.t1
agttgaatgaatgtctaccaggctcccatacttgtcacaaggacgctgagtgtctcaaccaagagggcaggtacagctgt
atgtgtaaacacggctatacaggtgacggacacacgtgcacgcgtcggacatatctgctgcctcttcaaccagacctgta
catcgctaccatcacaggagaatggcatatttctaccctctcaccaacagggtggatgagacataaagatttgacttttc
tctaa

Protein
Protein IDpfu_aug1.0_13284.1_32309.t1
Definition-
>pfu_aug1.0_13284.1_32309.t1
LNECLPGSHTCHKDAECLNQEGRYSCMCKHGYTGDGHTCTRRTYLLPLQPDLYIATITGEWHISTLSPTGWMRHKDLTFL

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