Gene
| Gene Model ID | pfu_aug1.0_1326.1_07899 |
|---|---|
| Locus | scaffold1326.1 : 1 ... 29218 : + |
| To GenomeBrowser | scaffold1326.1:1..29218 |
| Genes list of scaffold | scaffold1326.1 |
| Synonym | pfu_aug2.0_805.1_17845 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1326.1_07899.t1 | 8 | 1 | Spectrin | 2 | 23 | 0.0 | 227.2 | 0.091 | 340.0 | 1.5 |
| pfu_aug1.0_1326.1_07899.t1 | 8 | 2 | Spectrin | 27 | 80 | 0.0 | 227.2 | 1.8e-05 | 0.068 | 13.4 |
| pfu_aug1.0_1326.1_07899.t1 | 8 | 3 | Spectrin | 108 | 152 | 0.0 | 227.2 | 2.2e-06 | 0.0081 | 16.4 |
| pfu_aug1.0_1326.1_07899.t1 | 8 | 4 | Spectrin | 150 | 221 | 0.0 | 227.2 | 1.2e-13 | 4.6e-10 | 39.7 |
| pfu_aug1.0_1326.1_07899.t1 | 8 | 5 | Spectrin | 235 | 282 | 0.0 | 227.2 | 1.8e-11 | 6.7e-08 | 32.7 |
| pfu_aug1.0_1326.1_07899.t1 | 8 | 6 | Spectrin | 304 | 395 | 0.0 | 227.2 | 7.4e-17 | 2.7e-13 | 50.0 |
| pfu_aug1.0_1326.1_07899.t1 | 2 | 1 | PH_9 | 392 | 415 | 2.6e-14 | 53.3 | 0.2 | 740.0 | 0.3 |
| pfu_aug1.0_1326.1_07899.t1 | 8 | 7 | Spectrin | 398 | 490 | 0.0 | 227.2 | 1.1e-22 | 3.9e-19 | 68.8 |
| pfu_aug1.0_1326.1_07899.t1 | 8 | 8 | Spectrin | 505 | 585 | 0.0 | 227.2 | 6.1e-11 | 2.3e-07 | 31.0 |
| pfu_aug1.0_1326.1_07899.t1 | 2 | 2 | PH_9 | 559 | 648 | 2.6e-14 | 53.3 | 4.3e-17 | 1.6e-13 | 50.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1326.1_07899.t1 | gi|345481110|ref|XP_001606391.2| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_1326.1_07899.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1326.1_07899.t1 gataatttacaagaccacatgaacaaactgaagcgtttagctgcagacaggacccagcacctagagcagtctaagtggtt ccatgcttatatacgtgagagtagtgactttaaggactggatagccgatcagaatcagatagccgggtcagaggagtacg gctcagattacgaacatctactgattgaggagaaggttaggacagtactggagacacaggagaggctgaggaagacgtgg gacgaacagaagaaatatcacgataacctctatgaccttcacacattcttacgtgatgcacagcagctagataccatcag ctcctcacaagagggtatcactgttgatgacaggagaattaaggagataaacgacttagccgagaagctgatatctcagg gacgtacagatactgaagccgtcaaagataaaagagatggtgtcaatcaaagtgtagaagcactacaaaagaaacatgac agctttacaaagacaactcgtgctcagttggagcgtatcgaggacttaaagcagtttgcgaatgacttgactagtcaaga acattatgctactgatgaaataaacagtcgatgtgaggaagtggtcaaacggtgtaatgtattcctggaacactgtgaag gaagaggaaagaaactccaagactctaaaaattaccaactcttcttacgtaacctttatgaggcgttgatgtttaaccgt gtcgtagatgatctggttggatggatggaggacattgaatcacagctcatgtcagaggatcatgggaaggatttatactc cgtcaacaatctactgaagaaacatcaggtctgtcatacagaacatgacgtgtatgcatctctgagtgagccagctcaga tcagacgtgacaacttggaggacgcttcacacatgtatcagttctacagggacgtagaggacgagttaacatggatacaa gaaaaacaaccggcagcttcatcaacggacctcggaaactcactcagtgccgtccaaaatctcattaagaaacatcaggt tgaagccatcaccaaggaagctgagcgtttgattggtttattccccgatgcccaggaacacattgcagctaaacatgagg aaatggtacaagcctggaacaatctggtagagaaagctacgctacgaaagaaaaaactacaacaggctgatcaactacaa ctttactttaatgactatagggagcttactgcatggatcagtgagatgatggcaataattactgctgaggagctggcacg agacttaccgggagcggaagccatgatgacaagatgtaaggagcataaagccgctatcgacagtcatgaggaagccgtca gcaagttcttacagcgaggtcaaatcatgatagataacggacatttcctgtctgaggagattcaagagaaagtaacagat ctgaagtctgcatgggatgcccttacaaatacgtttggacaatacaagattttatgtgaacagaatatggaggctcagtt actgaagcatgagatggaacagctcgaggcatggatgaacacacgagaaccaatgctgagggaaaaacagtttggagaga atatccaggccgtagaagaactgttacgaagacaagatgactttgagaagactgtagatgctcagtctgagaagttcaag gacattataaggagaacacagcttgaacagtcagttatggaccagaaacaacgtcaggcggcctcagagaatgctcgggc agcagagaaacagccagtatcaccctgtatcttcctacataatgccacttgtgagattgccaaggattataccaaaaaga aacatgtgttccgtctaaagctaggggatggtgcagacttcctactcgaagcttccagtgaggctagcatgcaagattgg ctggccaaaatcaaccactatgctgtacaaactcccaatcctgcagacacggaattttttcatagttccaaccagtcaga ggaaactcagggtgactccggaggtcaggttcccgacgagcagcatgcgatggcaatgcagcgctcatcaagtccagaag gaggtcgtggtcgcagtgtgtcccccctggcagcccacagagaatctcaggaatttaaggaagaggaggtggccaaaata agggaggccatagacaaagggatccctcctcctgtagccgggtccataaatgactcctctcccaaaccctcaccgcggag agagaggagaaacgagagctttaaggaagcattagagtctgacctacatgatcactcattccagagcagtcaagactcgg gtgaggaagaagcaggtcagaagccgagagaggatgtgtttacccagccccctgtcaatggtggtatgaatggagatgga gatcacatcacagatgaagtgaaggtgcgtcccaagccctcaccccgttcaccacgccctatctctgagccgcctacagc tgtaccgcatgtagaaggacatgattcagctgatcacaaagagaaaaaacataaaagtatgtttggttttcttaaaaaga aaaaagacaaggatcatgatgagcataaagatcacaagaagcacaaaaaagacaaaaaggccgaggcatccgctcagtaa |
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Protein
| Protein ID | pfu_aug1.0_1326.1_07899.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1326.1_07899.t1 DNLQDHMNKLKRLAADRTQHLEQSKWFHAYIRESSDFKDWIADQNQIAGSEEYGSDYEHLLIEEKVRTVLETQERLRKTW DEQKKYHDNLYDLHTFLRDAQQLDTISSSQEGITVDDRRIKEINDLAEKLISQGRTDTEAVKDKRDGVNQSVEALQKKHD SFTKTTRAQLERIEDLKQFANDLTSQEHYATDEINSRCEEVVKRCNVFLEHCEGRGKKLQDSKNYQLFLRNLYEALMFNR VVDDLVGWMEDIESQLMSEDHGKDLYSVNNLLKKHQVCHTEHDVYASLSEPAQIRRDNLEDASHMYQFYRDVEDELTWIQ EKQPAASSTDLGNSLSAVQNLIKKHQVEAITKEAERLIGLFPDAQEHIAAKHEEMVQAWNNLVEKATLRKKKLQQADQLQ LYFNDYRELTAWISEMMAIITAEELARDLPGAEAMMTRCKEHKAAIDSHEEAVSKFLQRGQIMIDNGHFLSEEIQEKVTD LKSAWDALTNTFGQYKILCEQNMEAQLLKHEMEQLEAWMNTREPMLREKQFGENIQAVEELLRRQDDFEKTVDAQSEKFK DIIRRTQLEQSVMDQKQRQAASENARAAEKQPVSPCIFLHNATCEIAKDYTKKKHVFRLKLGDGADFLLEASSEASMQDW LAKINHYAVQTPNPADTEFFHSSNQSEETQGDSGGQVPDEQHAMAMQRSSSPEGGRGRSVSPLAAHRESQEFKEEEVAKI REAIDKGIPPPVAGSINDSSPKPSPRRERRNESFKEALESDLHDHSFQSSQDSGEEEAGQKPREDVFTQPPVNGGMNGDG DHITDEVKVRPKPSPRSPRPISEPPTAVPHVEGHDSADHKEKKHKSMFGFLKKKKDKDHDEHKDHKKHKKDKKAEASAQ |
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