Gene
| Gene Model ID | pfu_aug1.0_1324.1_58437 |
|---|---|
| Locus | scaffold1324.1 : 123296 ... 137475 : + |
| To GenomeBrowser | scaffold1324.1:123296..137475 |
| Genes list of scaffold | scaffold1324.1 |
| Synonym | pfu_aug2.0_60.1_00163 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1324.1_58437.t1 | 2 | 1 | adh_short | 23 | 100 | 2.8e-08 | 33.8 | 1.5e-07 | 0.00075 | 19.4 |
| pfu_aug1.0_1324.1_58437.t1 | 2 | 1 | adh_short_C2 | 25 | 107 | 1.6e-12 | 47.7 | 9.2e-05 | 0.46 | 10.2 |
| pfu_aug1.0_1324.1_58437.t1 | 2 | 2 | adh_short | 154 | 200 | 2.8e-08 | 33.8 | 3.0e-05 | 0.15 | 11.9 |
| pfu_aug1.0_1324.1_58437.t1 | 2 | 2 | adh_short_C2 | 206 | 283 | 1.6e-12 | 47.7 | 1.5e-12 | 7.6e-09 | 35.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1324.1_58437.t1 | gi|115702335|ref|XP_791357.2| | 3.0e-25 |
Transcript
| Transcript ID | pfu_aug1.0_1324.1_58437.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1324.1_58437.t1 atgttctcgcgcactcttcgattgctcttcattgttatgacgtcatcaatttacttggccagaaaaggcgccagctctgg tatcggcgagggcattagttatcatcttgcatcatgcggatcaaagctttctcttattgcgaggagcaaagacaaacttg aaaaagttgtcaaaatctgtatcgatcaaggactcgcaaaagaaaagataatttatactactggggatattactcaggac gatgtgaggaaggagctaatagaatcaacagtctctgcatttggtgtgattgatgtgcttttgatacgctatgcccgagc aagtatcaaatatacggattttgttctgagagctaggcgtctttcagagaagcttctcagtcagggatatgtttgtgacc gactaacatcgtcactgaggaagttctacggtcgatatggggaactcggcatacacaacgatgcccaactctccagaatg attaacaatgccggtatggcaggatttggacatatatcggatatatctgaagattactactacaacattgtggagctgaa tcagactacaccctatcttcttacacagctcgctgtccctcatttgaagaagagcaaagaactggcgcaatatggcatcc gagcaaatagtataagtcccggacttattaaaacaagtatccttgatggttttatacctgacgaagagaaaagaaatgct agatttgaaagtgaaatggctaaaataccattaggtcgattaggaacaaccaaggatatagctgaggcaatcgttttcct catttctgcatcctggataacaggacaagatatgattatcgacggtggaggtacactttttactaaactacctgatttga attga |
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Protein
| Protein ID | pfu_aug1.0_1324.1_58437.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1324.1_58437.t1 MFSRTLRLLFIVMTSSIYLARKGASSGIGEGISYHLASCGSKLSLIARSKDKLEKVVKICIDQGLAKEKIIYTTGDITQD DVRKELIESTVSAFGVIDVLLIRYARASIKYTDFVLRARRLSEKLLSQGYVCDRLTSSLRKFYGRYGELGIHNDAQLSRM INNAGMAGFGHISDISEDYYYNIVELNQTTPYLLTQLAVPHLKKSKELAQYGIRANSISPGLIKTSILDGFIPDEEKRNA RFESEMAKIPLGRLGTTKDIAEAIVFLISASWITGQDMIIDGGGTLFTKLPDLN |
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