Gene
| Gene Model ID | pfu_aug1.0_13143.1_39453 |
|---|---|
| Locus | scaffold13143.1 : 1 ... 7015 : - |
| To GenomeBrowser | scaffold13143.1:1..7015 |
| Genes list of scaffold | scaffold13143.1 |
| Synonym | pfu_aug2.0_429.1_30750 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_13143.1_39453.t1 | 2 | 1 | fn3 | 106 | 193 | 2.1e-22 | 79.0 | 9.2e-11 | 6.8e-07 | 29.3 |
| pfu_aug1.0_13143.1_39453.t1 | 2 | 2 | fn3 | 215 | 296 | 2.1e-22 | 79.0 | 2.4e-17 | 1.8e-13 | 50.4 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_13143.1_39453.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13143.1_39453.t1 atggcccaagtggggacagccggtcaaaatacccaatggacatcggcagatttcgcaaatgttgataatcacttacaaaa aatccagttatacgccaagtctttacaggacattatgtatcaagaacgcatgaagctttatccatggatgccgaacgcga cggcgacttctataaatttaggcccggctgctgtcccagaagccatagatacccgactgacgaaaatcgagtttaaactt ggggatttactcacgaattactccccttgtccatcgagaggagccgtaggtcctcctgtgtcgccacctggcccacctcc ccctagaaatgtaattatccaatctgaaacccttggcaacagctcttctatcgttgtatcgtgggatcctccaaatatca tgggaccggatgttccggtggacaaactacaatacaaagtctatttcgtaccaattgacgaatatggacaacagactgcc gctcaggttgtattcagtatttgtgatgcttcccaaacgagcgcctccataacggatctttacccgagctccttctacaa aatttgggttgggtcggttttatgcttatcgtctgaatccaacagttcggcaaaatctatgaagacaccggatatcatac cctctgaaccggttaatctaagagtagagggaacaaaagcgaacgccatagcaataagatggaatccgcctgcagtttct ggatcactcactaactacacgatctacgttgcatcagagaacggaagtcagttccaattgtccgttttgcctagagtgac caatacaattatgtatgacctcatagagggcactcgatacgtggtcagtgtcagcgcatactcggacaatggagagggcc ccaaaagcagtccgatagaggtcaaaacagacgtgtatt |
|
Protein
| Protein ID | pfu_aug1.0_13143.1_39453.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_13143.1_39453.t1 MAQVGTAGQNTQWTSADFANVDNHLQKIQLYAKSLQDIMYQERMKLYPWMPNATATSINLGPAAVPEAIDTRLTKIEFKL GDLLTNYSPCPSRGAVGPPVSPPGPPPPRNVIIQSETLGNSSSIVVSWDPPNIMGPDVPVDKLQYKVYFVPIDEYGQQTA AQVVFSICDASQTSASITDLYPSSFYKIWVGSVLCLSSESNSSAKSMKTPDIIPSEPVNLRVEGTKANAIAIRWNPPAVS GSLTNYTIYVASENGSQFQLSVLPRVTNTIMYDLIEGTRYVVSVSAYSDNGEGPKSSPIEVKTDVY |
|