Gene
| Gene Model ID | pfu_aug1.0_12869.1_10526 |
|---|---|
| Locus | scaffold12869.1 : 63936 ... 69337 : + |
| To GenomeBrowser | scaffold12869.1:63936..69337 |
| Genes list of scaffold | scaffold12869.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12869.1_10526.t1 | 3 | 1 | KSHV_K1 | 4 | 22 | 5.0e-06 | 26.4 | 0.00046 | 2.3 | 8.2 |
| pfu_aug1.0_12869.1_10526.t1 | 3 | 2 | KSHV_K1 | 24 | 64 | 5.0e-06 | 26.4 | 9.6e-07 | 0.0048 | 16.8 |
| pfu_aug1.0_12869.1_10526.t1 | 3 | 3 | KSHV_K1 | 74 | 112 | 5.0e-06 | 26.4 | 5.9e-05 | 0.29 | 11.1 |
Transcript
| Transcript ID | pfu_aug1.0_12869.1_10526.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12869.1_10526.t1 atgtcggagatctcctccttatcttgtaattttacttgtgtgttccgctgtgatcactgtcacttcgtcacgttgaagat ctccttatcttgtaattttacgcgtgtcttccgctgtgatcactgtaacgtcgtcatgttggagatctcctccttatctg gaaattatacatgtgtattccgctgtgatcactgtagcgtcgtcatgttggggatctcctccttattttgtaattatacg tgtgtgttccgctgtgatcactgtaacgtcgtcatgttggaaatctcctccttatcttgtaatcatacgtgtgtgttccg ctgtgatcactgtaacgtcgtcatgtttgagaatctcctccttatcttgtaa |
|
Protein
| Protein ID | pfu_aug1.0_12869.1_10526.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12869.1_10526.t1 MSEISSLSCNFTCVFRCDHCHFVTLKISLSCNFTRVFRCDHCNVVMLEISSLSGNYTCVFRCDHCSVVMLGISSLFCNYT CVFRCDHCNVVMLEISSLSCNHTCVFRCDHCNVVMFENLLLIL |
|