Gene
| Gene Model ID | pfu_aug1.0_1271.1_51251 |
|---|---|
| Locus | scaffold1271.1 : 91481 ... 112297 : - |
| To GenomeBrowser | scaffold1271.1:91481..112297 |
| Genes list of scaffold | scaffold1271.1 |
| Synonym | pfu_aug2.0_4.1_13322 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1271.1_51251.t1 | 1 | 1 | ABC_membrane_2 | 1 | 62 | 1.1e-15 | 57.5 | 1.0e-19 | 1.5e-15 | 57.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1271.1_51251.t1 | gi|260832203|ref|XP_002611047.1| | hypothetical protein BRAFLDRAFT_115732 [Branchiostoma floridae] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_1271.1_51251.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1271.1_51251.t1 tgaagaagtagcattttaccagggaaacaaaagagaacagttcatcatcttagcgacattcaacaaattagtagatcatc ttcgagatttcattttcttccgtcttcaaatgggatttgttgacaacataatcgccaaatacattgccacagtatttggt taccttgttgtgagcagacctttcctagacttggctcatcccagacatctgacaagctcacacagtgaaagactggagga ttactacaagagtgggcgcatgttggtgagaatggcagaggctattggtcgtattgtccttgcaggcagggagatgacca ggctggcaggattcacagcccgtataaccgaactaatgcatgttctggatgacttgaacaaaggccagtatcagagaacc atggtgtctgaccaatcaaatggcaagagtgcaaagaagacatttaaaccaggtgatggagttattaaaaatgaggacta tgtcataagtaaacatgctgatgataattttgataatgaaagaatacatgttacaatacaagtgaagtgtaacaaaatat ttgaggattatgaggatatcggttcatcagtgactttgatgctcaaagtacttgaaagactgaaagtcaaggatatgctc tttcgattgggaccaaaaagtggtcgatag |
|
Protein
| Protein ID | pfu_aug1.0_1271.1_51251.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1271.1_51251.t1 EEVAFYQGNKREQFIILATFNKLVDHLRDFIFFRLQMGFVDNIIAKYIATVFGYLVVSRPFLDLAHPRHLTSSHSERLED YYKSGRMLVRMAEAIGRIVLAGREMTRLAGFTARITELMHVLDDLNKGQYQRTMVSDQSNGKSAKKTFKPGDGVIKNEDY VISKHADDNFDNERIHVTIQVKCNKIFEDYEDIGSSVTLMLKVLERLKVKDMLFRLGPKSGR |
|