Gene
| Gene Model ID | pfu_aug1.0_12516.1_46513 |
|---|---|
| Locus | scaffold12516.1 : 3424 ... 11085 : - |
| To GenomeBrowser | scaffold12516.1:3424..11085 |
| Genes list of scaffold | scaffold12516.1 |
| Synonym | pfu_aug2.0_459.1_30783 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12516.1_46513.t1 | 3 | 1 | Ank_5 | 8 | 29 | 2.4e-12 | 46.6 | 0.21 | 630.0 | 0.8 |
| pfu_aug1.0_12516.1_46513.t1 | 1 | 1 | Ank_2 | 9 | 101 | 3.6e-20 | 72.1 | 1.4e-23 | 4.2e-20 | 71.8 |
| pfu_aug1.0_12516.1_46513.t1 | 3 | 1 | Ank_3 | 9 | 26 | 1.3e-14 | 52.8 | 0.13 | 400.0 | 1.7 |
| pfu_aug1.0_12516.1_46513.t1 | 2 | 1 | Ank_4 | 12 | 20 | 1.6e-10 | 41.2 | 0.27 | 800.0 | 0.7 |
| pfu_aug1.0_12516.1_46513.t1 | 3 | 2 | Ank_5 | 32 | 78 | 2.4e-12 | 46.6 | 2.6e-09 | 7.7e-06 | 25.9 |
| pfu_aug1.0_12516.1_46513.t1 | 2 | 1 | Ank | 41 | 71 | 1.5e-15 | 56.0 | 5.0e-10 | 1.5e-06 | 27.7 |
| pfu_aug1.0_12516.1_46513.t1 | 3 | 2 | Ank_3 | 41 | 68 | 1.3e-14 | 52.8 | 1.6e-09 | 4.9e-06 | 26.2 |
| pfu_aug1.0_12516.1_46513.t1 | 2 | 2 | Ank_4 | 42 | 94 | 1.6e-10 | 41.2 | 5.2e-13 | 1.5e-09 | 38.0 |
| pfu_aug1.0_12516.1_46513.t1 | 2 | 2 | Ank | 73 | 98 | 1.5e-15 | 56.0 | 1.5e-09 | 4.4e-06 | 26.2 |
| pfu_aug1.0_12516.1_46513.t1 | 3 | 3 | Ank_3 | 73 | 98 | 1.3e-14 | 52.8 | 7.1e-08 | 0.00021 | 21.2 |
| pfu_aug1.0_12516.1_46513.t1 | 3 | 3 | Ank_5 | 75 | 101 | 2.4e-12 | 46.6 | 2.5e-07 | 0.00074 | 19.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12516.1_46513.t1 | gi|149437061|ref|XP_001516108.1| | PREDICTED: ankyrin repeat domain-containing protein 16 [Ornithorhynchus anatinus] | 7.0e-18 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_12516.1_46513.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12516.1_46513.t1 atggctggagaccataacttctacaaagctgcacaaactggtgacttaacttttttcaaagcatgcagcaaaaaacatgg atctgatacatcatggctacacaaatactacgctaagtctggtgacacagtattacactactccgcacagtttggacatg tggagctcctgggctatttgatagagcagggagcggatgtagaaaaaccaaactttgacggaaagaaacctttacatgat gctgctcagaatggacattcagcatgtgtcaagtttctgcttgagaaaggagcaatgattgatggcctgaaaagagccga ttggtttgatcatactttgatagatatatacttagggccttcttaa |
|
Protein
| Protein ID | pfu_aug1.0_12516.1_46513.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12516.1_46513.t1 MAGDHNFYKAAQTGDLTFFKACSKKHGSDTSWLHKYYAKSGDTVLHYSAQFGHVELLGYLIEQGADVEKPNFDGKKPLHD AAQNGHSACVKFLLEKGAMIDGLKRADWFDHTLIDIYLGPS |
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