Gene
| Gene Model ID | pfu_aug1.0_12310.1_10449 |
|---|---|
| Locus | scaffold12310.1 : 1195 ... 39971 : - |
| To GenomeBrowser | scaffold12310.1:1195..39971 |
| Genes list of scaffold | scaffold12310.1 |
| Synonym | pfu_aug2.0_2350.1_02102 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12310.1_10449.t1 | 3 | 1 | Symplekin_C | 58 | 158 | 0.0 | 218.2 | 0.12 | 350.0 | 0.9 |
| pfu_aug1.0_12310.1_10449.t1 | 4 | 1 | DUF3453 | 58 | 97 | 2.8e-14 | 53.1 | 0.42 | 1300.0 | -1.4 |
| pfu_aug1.0_12310.1_10449.t1 | 4 | 2 | DUF3453 | 113 | 138 | 2.8e-14 | 53.1 | 0.00034 | 1.0 | 8.7 |
| pfu_aug1.0_12310.1_10449.t1 | 4 | 3 | DUF3453 | 142 | 209 | 2.8e-14 | 53.1 | 3.5e-14 | 1.0e-10 | 41.4 |
| pfu_aug1.0_12310.1_10449.t1 | 3 | 2 | Symplekin_C | 425 | 481 | 0.0 | 218.2 | 0.1 | 300.0 | 1.2 |
| pfu_aug1.0_12310.1_10449.t1 | 3 | 3 | Symplekin_C | 513 | 693 | 0.0 | 218.2 | 0.0 | 0.0 | 218.2 |
| pfu_aug1.0_12310.1_10449.t1 | 4 | 4 | DUF3453 | 528 | 558 | 2.8e-14 | 53.1 | 0.67 | 2000.0 | -2.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12310.1_10449.t1 | gi|194215636|ref|XP_001917080.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12310.1_10449.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12310.1_10449.t1 gagaggcaagaggagataaacaagtttaagaaagggaggacagacaagaagagcacgatagctttgttactatctgccga tatggactttacaccgtttgatatgagtgaggtcgccttcgatgtgattggtcctcactgtctggaggtcaactcagagg ttcaagagctcatcatacacaaagatccaaatctactggacaacttccttgatgaaatgctggcgtttcagagtgacaaa tcaatagatgtgaagaaagttgttattagtttcatggaagatgcctgcaaacatgatcctggattgttacataaaacctt accttgtcttcaaattcttcttcaagatgaaaatgtgaacgtacagaaaaaagtcatactgactctaccctcattgtaca aaatcatggtgtcggtatttaatttaccgcctactcttgccaagtctcaggtcagcagtgtacgtaagaatcttaagatg cacatgttgtcgttgctcaaacattctgcatcacatgactacctgacccagatcaccacattactcaccgatctcggagc cacaaactcagaggtgatgaaaaacatgccaaaaatagatgaaagtagaaaaaggaaagctgaggacatgtcatcaaaaa caaagaaagccagaacatacgaggtacccacatcaaggaaaggcatacagcagttcaagttgtcacgagtgaccaaacag ctagatcatgatgagttacaggccttgtctacatcctcgttaacgaggatccttaacgcagaaaagaatgcatcccaagg aaacgccttaccagctcgaacaaaactactcactacaattgtagctcaatttggcggaaaactcaaaacaatattacagg actatatatttgatgaccttaagagtcgttatgacttggctttctcgtggctatatcaggagtatgcgatctcacaggga ttctgtgctcctcatctcagacgtgaaggagatagcatggcaagctacgatgactgtctgacgaggctactgtctgtact actagaaacctcagagttcacatacagagaaaaggcatttgtattggacaaaacggttaggactgcagccatctttcata ctaaaatgttatatgagaatgctcagatcaagccatacattgagattgtcagttgtttacacatcagcagtagcatttat caagagaatcattctgagagcactggaaagtccttctttgatatgtacatgtatgataagaaaaaatcacattatgatca tgagtatataaaatacatattgtcagttgtttacacatcagctgtggcctttatcaagagaatcattctgagagcactgg aaagtcctgtaaaagagatgagtatgcagtccccagaattactaacgctagtggagaactgtcctaaaggagcagagacc ctggttacacgtgttattcacatcctcacagataaagtggcaccatctcctgagttggtagagagggtacgtgatctgta tcacaaacgagttcctgatgtacgattcctgataccagtattgacaggtctaactaagaaagaagttatccaggccttgc ctaagttactcaagttgaacccagtggtagttaaggaagtgtttaacaggttactagggggccacggagatgtgacgtac acctcaccactgactccagtagacttacttatagccctgcataatatagatcctgttaaatgtgacatgaaaaccattat caaagccaccaacctgtgcttcagtgagaagaagatctacacccaggaggtgctagccgtagtgatgaagtccctgatgg accaggagcccctccccacactcttcatgaggaccgtgttacagtctctgtctatgtacccaaggctgataggatttgtc cttaatgtcttacagaggctaattactaaacaggtttggaaacagaagaaggtttgggaaggattcatacgatgttgtca gaagacaaaacctcagtccttctttgtcctgttacaattaccagctgttcacttgaagagtgtgtttgacagctgtcctg atctcagagagccattactggctcatgtcaactccttcactccacatcagattcggttcatcgtctactga |
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Protein
| Protein ID | pfu_aug1.0_12310.1_10449.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12310.1_10449.t1 ERQEEINKFKKGRTDKKSTIALLLSADMDFTPFDMSEVAFDVIGPHCLEVNSEVQELIIHKDPNLLDNFLDEMLAFQSDK SIDVKKVVISFMEDACKHDPGLLHKTLPCLQILLQDENVNVQKKVILTLPSLYKIMVSVFNLPPTLAKSQVSSVRKNLKM HMLSLLKHSASHDYLTQITTLLTDLGATNSEVMKNMPKIDESRKRKAEDMSSKTKKARTYEVPTSRKGIQQFKLSRVTKQ LDHDELQALSTSSLTRILNAEKNASQGNALPARTKLLTTIVAQFGGKLKTILQDYIFDDLKSRYDLAFSWLYQEYAISQG FCAPHLRREGDSMASYDDCLTRLLSVLLETSEFTYREKAFVLDKTVRTAAIFHTKMLYENAQIKPYIEIVSCLHISSSIY QENHSESTGKSFFDMYMYDKKKSHYDHEYIKYILSVVYTSAVAFIKRIILRALESPVKEMSMQSPELLTLVENCPKGAET LVTRVIHILTDKVAPSPELVERVRDLYHKRVPDVRFLIPVLTGLTKKEVIQALPKLLKLNPVVVKEVFNRLLGGHGDVTY TSPLTPVDLLIALHNIDPVKCDMKTIIKATNLCFSEKKIYTQEVLAVVMKSLMDQEPLPTLFMRTVLQSLSMYPRLIGFV LNVLQRLITKQVWKQKKVWEGFIRCCQKTKPQSFFVLLQLPAVHLKSVFDSCPDLREPLLAHVNSFTPHQIRFIVY |
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