Gene
| Gene Model ID | pfu_aug1.0_12264.1_03215 |
|---|---|
| Locus | scaffold12264.1 : 9496 ... 18762 : + |
| To GenomeBrowser | scaffold12264.1:9496..18762 |
| Genes list of scaffold | scaffold12264.1 |
| Synonym | pfu_aug2.0_852.1_07949 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12264.1_03215.t1 | 1 | 1 | TBCA | 8 | 97 | 1.1e-30 | 105.4 | 1.2e-33 | 1.5e-30 | 105.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12264.1_03215.t1 | gi|297675531|ref|XP_002815728.1| | PREDICTED: tubulin-specific chaperone A [Pongo abelii] | 2.0e-29 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 4 |
| egg-4cell | 2 |
| 8-16cell | 2 |
| egg-Dshape | 3 |
| >Adult tissues | |
| Dshape | 3 |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_12264.1_03215.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12264.1_03215.t1 atggctgatccaagagtgaggcagataaaaatcaaaacaggtgttgtcaaacggcttgccaaggagaaatgttcatatga gaaagaaattacaagtacagaggaaaaaatagaaaagatgaaagcagaagggaaagatgaatatgacatcaagaaaatga atgaagttctacaggagtccaaaatgatggtgccagatgctatgaacagattgagaaaggcatatgatgatttggaacaa actttggagaaggaaaaagatttaaatgaatcagaggaatacaaagctgcacaaacagccctagaagacggcaaaaaggt cctggaggtttcataa |
|
Protein
| Protein ID | pfu_aug1.0_12264.1_03215.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12264.1_03215.t1 MADPRVRQIKIKTGVVKRLAKEKCSYEKEITSTEEKIEKMKAEGKDEYDIKKMNEVLQESKMMVPDAMNRLRKAYDDLEQ TLEKEKDLNESEEYKAAQTALEDGKKVLEVS |
|