Gene
| Gene Model ID | pfu_aug1.0_12191.1_10425 |
|---|---|
| Locus | scaffold12191.1 : 26856 ... 40619 : + |
| To GenomeBrowser | scaffold12191.1:26856..40619 |
| Genes list of scaffold | scaffold12191.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12191.1_10425.t1 | 2 | 1 | tRNA-synt_2 | 13 | 142 | 0.0 | 172.2 | 5.1e-31 | 2.5e-27 | 95.5 |
| pfu_aug1.0_12191.1_10425.t1 | 2 | 2 | tRNA-synt_2 | 152 | 236 | 0.0 | 172.2 | 4.7e-25 | 2.3e-21 | 75.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_12191.1_10425.t1 | gi|328716991|ref|XP_003246091.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_12191.1_10425.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12191.1_10425.t1 atgaaaccagaaaattatcatctacactcctatagtaatgaatatttttcacaaggttatttatacatcgatactccagt tctaacatctaatgattgtgaaggagccggggaaacatttacaatacagagagtgaagggtgttaatacagacggcactg atcaagaatttttcggtaaacccgtacatttgacggtatcaggacagttacacctagaggctattactggaggtattcat aagtgttacacagtaagtccaactttccgagcggagaagtcacatacccgacatcatctggcagagttcagtatggttga ggctgaaatggctttcacttcttcacttgaggatataatgacggtgatggaagaattaataaaatttgttaccttggaga ctgtaaacaaagctaacaaagatattgaatacctacataatataaattcagttgatatgaaggtttcagcagtagatttg ttattaccagaagtaggtgaattgttcggaggttcattgagagaagagagatatgatgtattacaggaaaaactagccaa ggaaggtctactagaaaaattaaactggtacctggacatcaggaagtatggctcagccccacacggtggatttggtatgg gatttgacagatacctacagtttctggtcaacatgtccactgtcagagatacctgtcccttccctaggtaccatctgaac tgtaaaatgtag |
|
Protein
| Protein ID | pfu_aug1.0_12191.1_10425.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12191.1_10425.t1 MKPENYHLHSYSNEYFSQGYLYIDTPVLTSNDCEGAGETFTIQRVKGVNTDGTDQEFFGKPVHLTVSGQLHLEAITGGIH KCYTVSPTFRAEKSHTRHHLAEFSMVEAEMAFTSSLEDIMTVMEELIKFVTLETVNKANKDIEYLHNINSVDMKVSAVDL LLPEVGELFGGSLREERYDVLQEKLAKEGLLEKLNWYLDIRKYGSAPHGGFGMGFDRYLQFLVNMSTVRDTCPFPRYHLN CKM |
|