Gene
| Gene Model ID | pfu_aug1.0_121.1_22007 |
|---|---|
| Locus | scaffold121.1 : 18142 ... 22405 : - |
| To GenomeBrowser | scaffold121.1:18142..22405 |
| Genes list of scaffold | scaffold121.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_121.1_22007.t1 | 2 | 1 | TPR_12 | 50 | 116 | 8.7e-18 | 64.0 | 2.7e-13 | 2.9e-10 | 39.9 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 1 | TPR_1 | 51 | 74 | 1.1e-11 | 43.8 | 0.004 | 4.2 | 7.1 |
| pfu_aug1.0_121.1_22007.t1 | 3 | 1 | TPR_11 | 51 | 80 | 9.4e-11 | 41.2 | 0.00058 | 0.61 | 9.7 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 1 | TPR_2 | 51 | 78 | 6.5e-08 | 31.9 | 0.0015 | 1.6 | 8.8 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 1 | TPR_7 | 54 | 84 | 2.4e-07 | 30.0 | 0.05 | 53.0 | 3.9 |
| pfu_aug1.0_121.1_22007.t1 | 3 | 1 | TPR_8 | 92 | 114 | 8.9e-06 | 25.1 | 0.0011 | 1.2 | 9.1 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 2 | TPR_1 | 92 | 116 | 1.1e-11 | 43.8 | 6.1e-06 | 0.0064 | 16.0 |
| pfu_aug1.0_121.1_22007.t1 | 3 | 2 | TPR_11 | 92 | 155 | 9.4e-11 | 41.2 | 1.4e-08 | 1.5e-05 | 24.5 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 2 | TPR_2 | 92 | 115 | 6.5e-08 | 31.9 | 7.5e-05 | 0.079 | 12.9 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 2 | TPR_7 | 93 | 116 | 2.4e-07 | 30.0 | 8.8e-06 | 0.0093 | 15.7 |
| pfu_aug1.0_121.1_22007.t1 | 2 | 2 | TPR_12 | 126 | 199 | 8.7e-18 | 64.0 | 1.3e-08 | 1.4e-05 | 24.9 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 3 | TPR_1 | 128 | 152 | 1.1e-11 | 43.8 | 0.00015 | 0.16 | 11.6 |
| pfu_aug1.0_121.1_22007.t1 | 3 | 2 | TPR_8 | 129 | 150 | 8.9e-06 | 25.1 | 0.06 | 63.0 | 3.6 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 3 | TPR_2 | 130 | 155 | 6.5e-08 | 31.9 | 0.0034 | 3.6 | 7.7 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 3 | TPR_7 | 147 | 161 | 2.4e-07 | 30.0 | 0.52 | 550.0 | 0.7 |
| pfu_aug1.0_121.1_22007.t1 | 3 | 3 | TPR_8 | 169 | 194 | 8.9e-06 | 25.1 | 0.0058 | 6.1 | 6.8 |
| pfu_aug1.0_121.1_22007.t1 | 3 | 3 | TPR_11 | 169 | 194 | 9.4e-11 | 41.2 | 0.025 | 26.0 | 4.5 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 4 | TPR_7 | 170 | 194 | 2.4e-07 | 30.0 | 0.022 | 24.0 | 5.0 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 4 | TPR_1 | 170 | 194 | 1.1e-11 | 43.8 | 0.0043 | 4.6 | 7.0 |
| pfu_aug1.0_121.1_22007.t1 | 4 | 4 | TPR_2 | 170 | 195 | 6.5e-08 | 31.9 | 0.013 | 13.0 | 5.9 |
Transcript
| Transcript ID | pfu_aug1.0_121.1_22007.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_121.1_22007.t1 atggtccagcaaatcaacagagaaatggacgaaatagaactagcatacgttgatggccgttacaatgaatgtatcaaccg tgctgaactatgtctgaacactgtgacgtcatatagtgacatcaccataccaaacgtgatgggtatcatagccaaactac acagttatataggtaacgctgccatcgagaacagggactatgtggcagcactggatcatcaccacagggacctacagata ggtgaagaaggagacgacgaagaggccatttcaagagcccttggtaatcttggaagaatctatgtcttccagaacaatca ccagaaagccctcgaattattctctcgtaaggtgcctctttgtaagacacgtctggagacagcgtggctgtaccacgaga tcggtaactgcttcctagtgttagggcagtacaagtttgcaatggaagccgccctaaggtccctgggggcggctgaagag gccgtggaatggagctatcaactacaggctcttgttttacttggcgttgcagaagtgaaattgaagagttttacgaatgc tatcaacactttcgaaagggcgagagatcaagcaagaatgcaaggtgacataaaggcagaagaagcaataacagaggcaa ttcatgatgtaaatgacaaaataatggacgaactaaaatcagctcgtggtgacatcagtagatcagaacgaggttataat aagtcacgtggcgacttttcaggtaaattttctcacaatccccgatctcgagctgagtggtcggactattcaagcatatt tattccggaagatgacggtgacgtatcattgacagaaaccggatatgacacagattatttacatcttgatctcgatcaat taaggagcgactgggatacgtcgacttttggatctcaagcccaacttaattcaggacgcatttctataaaggatacagac agacgcacgatgcgttcagcgaatcacattcgatctggatttaggtcaacgatggcaatgtccagtgtggcgtcaatact gcgtcataacaccatcgcgaattga |
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Protein
| Protein ID | pfu_aug1.0_121.1_22007.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_121.1_22007.t1 MVQQINREMDEIELAYVDGRYNECINRAELCLNTVTSYSDITIPNVMGIIAKLHSYIGNAAIENRDYVAALDHHHRDLQI GEEGDDEEAISRALGNLGRIYVFQNNHQKALELFSRKVPLCKTRLETAWLYHEIGNCFLVLGQYKFAMEAALRSLGAAEE AVEWSYQLQALVLLGVAEVKLKSFTNAINTFERARDQARMQGDIKAEEAITEAIHDVNDKIMDELKSARGDISRSERGYN KSRGDFSGKFSHNPRSRAEWSDYSSIFIPEDDGDVSLTETGYDTDYLHLDLDQLRSDWDTSTFGSQAQLNSGRISIKDTD RRTMRSANHIRSGFRSTMAMSSVASILRHNTIAN |
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