Gene
Gene Model ID | pfu_aug1.0_12.1_36234 |
---|---|
Locus | scaffold12.1 : 370586 ... 382000 : + |
To GenomeBrowser | scaffold12.1:370586..382000 |
Genes list of scaffold | scaffold12.1 |
Synonym | pfu_aug2.0_595.1_17623 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_12.1_36234.t1 | 2 | 1 | ABC_membrane | 147 | 333 | 5.4e-36 | 124.4 | 1.4e-39 | 1.1e-35 | 123.4 |
pfu_aug1.0_12.1_36234.t1 | 2 | 2 | ABC_membrane | 335 | 368 | 5.4e-36 | 124.4 | 0.018 | 130.0 | 1.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_12.1_36234.t1 | gi|345489380|ref|XP_003426124.1| | 0.0 |
Transcript
Transcript ID | pfu_aug1.0_12.1_36234.t1 |
---|---|
Definition | - |
>pfu_aug1.0_12.1_36234.t1 atgaacgacgtagggggtatatctgatgtctttaggtttgtgaccttccacctttattttcctgccattttagtacagtt tgtcctttgctggttcagtgataaagtacaggagtttgaacaagtcacctctgaagattgcttccgatttatattcaagt ttaccaagagaccaattcagttttacaaatttactttttgtcaggagtatttatattcgtcggtacgtaatttagtcaag gaaggcactgacgaaaatgacgaaaattgaatacagcagagttcttcggaaactccagccacagatggaatagaaatccg ctccatgaacaaagatggcactacgtacacggaggtcaacgtagtggacggcaagaaatgtcagccggccaagctactta atgctttagtgtctgcctactcccccatgtgccttatgacagctttctacaaacttatctttgatgtctttcagttcctt agtccacttattttaaagttattaatacagtttacctatgacaagtcagaattcctatggaggggatatttttatgccat tttgatgttagtggttgccattcttcagtcattcattctacaccagtatttccacggctgcttcttgctgggaatgagga tacgaacagctctcatatctgccatttatagaaagatgttgaatctgtctaacactgccaggaaaaatgccacagttggc gagatagtaaatctaatgtctgtggacgcccagagatttatggatctaatgacatatatacacaccatatggtccggacc actacagattattattgctttgtacttcctgtggcgagaacttggtgctagtgtatttgcaggatttgctgttatggtca tattgattccgatcaatgccctcatcgcaaaaaagaccagagatttacaggtcaagcaaatgaatatgaaggacaaaagg attaaactaatgaatgaggtgctcaatggaataaaggtatccttagtgacttttgctgtatatgtactgagtgacccaac aaatattctggatgcagagaaagcttttgtatcattgtccctatttaatattttacgttttccgatgtccatgttgcctc aagttatatccaacattgtacagactacagtatctctgaagagacttcaggctttcttgaacaatgaggaactggaccct aattgtgtgcaaagggacatcaacagcaaacattcaatcacagtggacaaagcctcctttacatgggaaaaagatgcaga gaaaactctcagcaagtaa |
Protein
Protein ID | pfu_aug1.0_12.1_36234.t1 |
---|---|
Definition | - |
>pfu_aug1.0_12.1_36234.t1 MNDVGGISDVFRFVTFHLYFPAILVQFVLCWFSDKVQEFEQVTSEDCFRFIFKFTKRPIQFYKFTFCQEYLYSSVRNLVK EGTDENDENXIQQSSSETPATDGIEIRSMNKDGTTYTEVNVVDGKKCQPAKLLNALVSAYSPMCLMTAFYKLIFDVFQFL SPLILKLLIQFTYDKSEFLWRGYFYAILMLVVAILQSFILHQYFHGCFLLGMRIRTALISAIYRKMLNLSNTARKNATVG EIVNLMSVDAQRFMDLMTYIHTIWSGPLQIIIALYFLWRELGASVFAGFAVMVILIPINALIAKKTRDLQVKQMNMKDKR IKLMNEVLNGIKVSLVTFAVYVLSDPTNILDAEKAFVSLSLFNILRFPMSMLPQVISNIVQTTVSLKRLQAFLNNEELDP NCVQRDINSKHSITVDKASFTWEKDAEKTLSK |