Gene
| Gene Model ID | pfu_aug1.0_12.1_36211 |
|---|---|
| Locus | scaffold12.1 : 16226 ... 35831 : + |
| To GenomeBrowser | scaffold12.1:16226..35831 |
| Genes list of scaffold | scaffold12.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_12.1_36211.t2 | 1 | 1 | REJ | 449 | 704 | 1.3e-22 | 79.7 | 1.1e-25 | 2.3e-22 | 78.9 |
| pfu_aug1.0_12.1_36211.t2 | 1 | 1 | PLAT | 1272 | 1386 | 3.0e-17 | 63.0 | 1.0e-19 | 2.2e-16 | 60.2 |
| pfu_aug1.0_12.1_36211.t2 | 1 | 1 | PKD_channel | 1656 | 2024 | 0.0 | 219.5 | 0.0 | 0.0 | 219.5 |
| pfu_aug1.0_12.1_36211.t2 | 1 | 1 | Ion_trans | 1812 | 2014 | 1.6e-11 | 43.8 | 7.3e-15 | 1.6e-11 | 43.8 |
Transcript
| Transcript ID | pfu_aug1.0_12.1_36211.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36211.t1 atggaggctttctctttcgggacatatctactgaccttaaacctgacacctacatccggatcgtctgctacaaaagaagt catattattctatgaggagcccatcattggatttgcaatttacagatacccctatgcaccccttaacgaagaagttcatt tcaatgttactttcaccaacgcatcaaacgtagagacggaatggttccttgatacaaacgacacctaccttctaagacac gatggtcaacctcgttcctttcttcagaatttcacttttaccgtaccaggagaccataacgttactgtggtggcagcaaa tactgtaacaagaacgttcgattctatgatagtgtcagcctattacagactgaacggttttgacatcacgacagaaaacc gtacagtggatccgctagatcccgtcatattcaacgtaactttgtcacctaccgcagaccttccaatgggatccctaaaa cttaacctttcctacggagatggaacagatgagaacataaatctagacagtgttatgtctaatttacaaggatctggtca tacagtgcaacactattattcacaaggctactacgacgtgactgctactatttactcggaaatagactccgtcaacttta ctatgagagtctctgtatgggaaaatgttaccctttcgatgtcttcagtagaaattagcgctgtgaaagaagaaataacg ttcaattttctcaatagtcctttttctgcgaccttatacctcattgattttggagacgagaacactgtttcaaacaacgt tactgattggactcaagcatatgagactatcattttatcacatgcctatattactgatggtatcttcaacgtcaccatga gagcctggaatccggaatactcgagtcattcatcttaccttatcactgtccagcatcctattcccagcgaaaacattaca gtcaccgcagtacgtgataccatacctattccaaacggactgcttgaactatctctagttttgaaggaggataacccatc gccgactgatgttctctgtacattcaattttgtggatgagacaatttttaacataagcacgtcaatcatctacaacgtac ctgttacacagtactacacatacaattctacagggagcaggactgtatcgatagattgccagaaccttgtcagtaccatg cgtaaagatgtcatggtggatgttttcttcatgttgaacggctttgacgtccttgctagcgaagggactgtgggaaccaa tgaacaagctttgttttctgttaaactttccccgaatgccaacttgtccatgggcacactaaatatgaacatttcgtgct caatcaactgcttaaagaaaacagcgataacaaatatgatcaacataattactcagtgttctcaatgtactcgccaagtg gtttatagctggagactgttcaacgcagattctaatgttgaggacacagacttctcgtcaaagacactaacaggtttggg tttggcctctgttgtaataaaggcgaacactctcgagcctgatagaagatactcgttgaaacttacagccaggtacgccg attccacagtggaaaccttccaaacccacgaatttctcaccaattttcctccatacaacggacgctgccaaagcaacgcc aatgaatacaaggctccgttagagatggtagacataacgtgtgaggattggttggatgagggcagctactctaccaggga cgaaaccagggacagagctaacaaggaacccctacgatataaatacgagacaaaaacaatgagaaaagatgctcagaatg tcacagaagtggtgtcagcaacacttgatgaaggaggtatcaatgacattggtcacatgcatctcaaaatatatatttgc ttatag |
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| Transcript ID | pfu_aug1.0_12.1_36211.t2 |
| Definition | - |
>pfu_aug1.0_12.1_36211.t2 atggaggctttctctttcgggacatatctactgaccttaaacctgacacctacatccggatcgtctgctacaaaagaagt catattattctatgaggagcccatcattggatttgcaatttacagatacccctatgcaccccttaacgaagaagttcatt tcaatgttactttcaccaacgcatcaaacgtagagacggaatggttccttgatacaaacgacacctaccttctaagacac gatggtcaacctcgttcctttcttcagaatttcacttttaccgtaccaggagaccataacgttactgtggtggcagcaaa tactgtaacaagaacgttcgattctatgatagtgtcagcctattacagactgaacggttttgacatcacgacagaaaacc gtacagtggatccgctagatcccgtcatattcaacgtaactttgtcacctaccgcagaccttccaatgggatccctaaaa cttaacctttcctacggagatggaacagatgagaacataaatctagacagtgttatgtctaatttacaaggatctggtca tacagtgcaacactattattcacaaggctactacgacgtgactgctactatttactcggaaatagactccgtcaacttta ctatgagagtctctgtatgggaaaatgttaccctttcgatgtcttcagtagaaattagcgctgtgaaagaagaaataacg ttcaattttctcaatagtcctttttctgcgaccttatacctcattgattttggagacgagaacactgtttcaaacaacgt tactgattggactcaagcatatgagactatcattttatcacatgcctatattactgatggtatcttcaacgtcaccatga gagcctggaatccggaatactcgagtcattcatcttaccttatcactgtccagcatcctattcccagcgaaaacattaca gtcaccgcagtacgtgataccatacctattccaaacggactgcttgaactatctctagttttgaaggaggataacccatc gccgactgatgttctctgtacattcaattttgtggatgagacaatttttaacataagcacgtcaatcatctacaacgtac ctgttacacagtactacacatacaattctacagggagcaggactgtatcgatagattgccagaaccttgtcagtaccatg cgtaaagatgtcatggtggatgttttcttcatgttgaacggctttgacgtccttgctagcgaagggactgtgggaaccaa tgaacaagctttgttttctgttaaactttccccgaatgccaacttgtccatgggcacactaaatatgaacatttcgtgct caatcaactgcttaaagaaaacagcgataacaaatatgatcaacataattactcagtgttctcaatgtactcgccaagtg gtttatagctggagactgttcaacgcagattctaatgttgaggacacagacttctcgtcaaagacactaacaggtttggg tttggcctctgttgtaataaaggcgaacactctcgagcctgatagaagatactcgttgaaacttacagccaggtacgccg attccacagtggaaaccttccaaacccacgaatttctcaccaattttcctccatacaacggacgctgccaaagcaacgcc aatgaatacaaggctccgttagagatggtagacataacgtgtgaggattggttggatgagggcagctactctaccaggga cgaaaccagggacagagctaacaaggaacccctacgatataaatacgagacaaaaacaatgagaaaagatgctcagaatg tcacagaagtggtgtcagcaacacttgatgaaggaggtgaagcctctgccatgggcaaagctgtacaaatgggagacatt atttttaactacgtggtacaagtatgggtatacgtgtatgactattacggtgatagcaactctacttacttctctatcac tgtacgacctgatgatgctgtatcagggacacctgatccagaagccgtcaaacaaatgttctctaaattcgacgatgttg tggagaagacgttgaagggaggtaacgccatggccgcggtcggcctctgtggatctatggcctccgtgttagggccacct gactcgaaaacaaagggcctgtcgaatactttgaaagactctgttgtaaatactcgaacacttggtttgctgaaagcttc agatgctcagaaaataagtcggaacctcgaggctatcgttagcaacccggggtatatatctgacgaagtcactctaaatg gagctaatgtatccgagaagatcatagaaaaggtccgcagtttaacagaaacaataccttttcctgtgggagaaattcaa agtatcgaggaatctgttagtggaacagccgcgtcggtggacaaaattctaggaaatcttatgcccgatgttatagtaga cgtcaatgaaaacttcaccgtggattcgctctatgatcaactcctcctggacgaggccgataccatagcacagatgaggg cctctgataattacacggaggatgacatcacagcgtacgaggagtcgctaagaaatcaatccgtagaattatatgaccaa aagatacaacaaagagaaacgatgctggcaaaagctaattcagcaaatgatagtgtaccactgctgatgaactcgatcgg aagtatgtatgaagtcaaactgaaattaacagaagtaggcgcgaacagatccgagataattcgagattcgatgaaagttg cagtagagaaagtcacccttgatatgctaactgaaagaaatggcacagaggagccccttggcggtgtcaagttgggcttc ctactcaacggaacaggctcaggaaacgacatatctataaagcaatcagtgtttgaaaagccaccttacatcggtggagg taacgtcggatcgctgacgtcaaaagcaatccagattgacgtaagtgatgaagacatcgtaccagaggcttccataccta actcaaacattgtccatgccagggtcattactcctacctacacgtctggtgatcccgagggtatgttctatatcagatat gaaataaggaacgatgacgactctactatgatttacctcaaaccggacgatttggatcccagtggctctggtgggacttt gtaccatctttatttacaactcgatgtgttgcctacgacagccagcaatttgtttaaccagcttctgtcactggctgact gggatgatgactatggtcttaaagttataataccatctatgcctaaagggaagtactacatcggcttcaagccacaagaa gtaattgttgcgaagaagagacgcaggaagaggtctgctactgctcttacaacaactccagccacaaactctagcgtaca aacaggctctaacgtcagccttgttatgactacaaccggatgtcgctcatgggacgatgcgcagcagtcatgggtatcaa acggatgccaggtccttccattttcaactgttaacgagacagtatgtagatgcccacgtcagtctggaggtattgtcttc gctaccacgttttacacggccccgaacaccatagatttctctacagtattcagtaaatttgacctgtctaatgcttccgt gtatggtacctgtctgggtattatagtgatatggatcattgctgttgtactattgagaagacaagataagaaagatcaag aaaagtgggcgatccacttcctgtcagacggtgactgtaaggatagttacttctacatgatcacggtggagactggtatg aggcgtggtggagggaccaaatctaacgtcagcttcgtgcttacaggggatgacggagacaccggggtcagggctttgga tgatggtataagaaaggggtttccatcgggaagtgcaagaagatttttcatgggaaccaaaactccattaggtccattga cttatctgagaatttggcatgataactctggtaatatgagcgagcagtcctggtttctgaaccaagtcatcgttgatgat ccacaagaaaggcaaagatacgtgttcctgtgcgatcattggatggctctggaagaggatgatggtcaaattgagagggt cataccgttatctggcaaggaaaacataactacatttaacaccctattctttcaacatgcgcaattcaacataacagaga accacttatggctttctctgctcatgcgtcctaagagaagtagtttcacgagggtacagcgtgcgtcttgtatcctggct ctcctgtttcttaccatgatatcaaatgccatgttcttccggtcgtctgatgacaatgcttccgctgacacggtttccat ggggggattgaagttttccttcagtattttcttcgtttctatcatcggtatccttatcaccactcctccaattgtcattg tgacgatgatattcaagaagtgcaaaccgaaaccgatcaaaactaaggtgaagccatcatctgacggcactacggcgccg gtcaatcagtccagcaaggacttcaatggagaggacttggttgctagtgaccatctgacgttcccatactggacggctta catagcatgggtgatcatcggtctagccgtcgtttcctctgccttctttctgcttctatacagtatgcaatgggggtcgt caaaatcagaggagtggctgtcttcgtttgtgttttccttcgtggagtcattgttttgcgttgatcctttgaaagttgtg gtactagcgatggtattttctattttgtttaaacgaccagttgaagatgaaatacctaaagttgatgtagagaagttaaa agaagcgtccatagttgtcaatgatggatctacaagagaagaaacatatacttgtgactacacggatttaacatggccat acccttgtgtgaactcatacagcgtgtttagcgaggatgaaggggactactgtgttaggtggactccatacggaggcagc acatgcgcaagtcctactgccgtacaacaggacaagtcactgctggcatggagctacaccgacgctagtgatatatgggg tattccaatcacgggtgaatatggcacgtacggaggaggagggtacctattgcagttcatagaagatggatctagttcgc aaaccatgctagagaggttgttacaaaacaattggatcgatagaggaacgagagcagttttcttagaatttactgtttac actgcaaatgttaatctatttctatacggccagttcctgacagagtttacagagattggtggtgccttcacttaccatta tgtccaggcgttcagaccagttgattctcttggtggaatgggggctttctctcttgtttgctacgcagtattcatcatat atataatttatatgacggtaagacctattctcaaaattaagaaagatggatgccgaaaattcttcaaggacatttggaat tggattgaccttgtatgcgctatcctgagttactctctgattgctgtatttggagttagactgaattatgctaaacaagc catggcaaagtactacgaagaactggcaaaacctaatagtgaaaaagatataatcaactttcagcatatcgtcgtatggg acaacgttttcaacataattcttggtatactagtattcattataacgctgcgagtattgagaatacttggttacaacaga aggctccaagaagtatcaagtgttgtttcacatgcctccactgagctgataggatttgtcattgtttttggtatcatatt ctcagcatacataagtttaggtttcctgctgtttacaaccatcgaggaatacaagagtttgtttgcggcatggggaagcc ttactaatacacttattggaaagaacagctttgacaaaatggtggctgtatcacctaacatggcacaattctattatttc acctttgtcttctgcgtgttgatgtcgcttgccactatgtttgcagccatattgaacaagagtatatctgagatcaagga tcaaaccaaacaggcagacgatgagttcgggattttagacttcctgatcaagatgttgaaaagcatagttggcattgcct ataatccgactagtaaaccgatccaagaaccaaatccaaaagccatctaccgaggacgtactcggggaagacgacggaaa cccaagaagagggtcacatataaaccctttgatgacgtttga |
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Protein
| Protein ID | pfu_aug1.0_12.1_36211.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_12.1_36211.t1 MEAFSFGTYLLTLNLTPTSGSSATKEVILFYEEPIIGFAIYRYPYAPLNEEVHFNVTFTNASNVETEWFLDTNDTYLLRH DGQPRSFLQNFTFTVPGDHNVTVVAANTVTRTFDSMIVSAYYRLNGFDITTENRTVDPLDPVIFNVTLSPTADLPMGSLK LNLSYGDGTDENINLDSVMSNLQGSGHTVQHYYSQGYYDVTATIYSEIDSVNFTMRVSVWENVTLSMSSVEISAVKEEIT FNFLNSPFSATLYLIDFGDENTVSNNVTDWTQAYETIILSHAYITDGIFNVTMRAWNPEYSSHSSYLITVQHPIPSENIT VTAVRDTIPIPNGLLELSLVLKEDNPSPTDVLCTFNFVDETIFNISTSIIYNVPVTQYYTYNSTGSRTVSIDCQNLVSTM RKDVMVDVFFMLNGFDVLASEGTVGTNEQALFSVKLSPNANLSMGTLNMNISCSINCLKKTAITNMINIITQCSQCTRQV VYSWRLFNADSNVEDTDFSSKTLTGLGLASVVIKANTLEPDRRYSLKLTARYADSTVETFQTHEFLTNFPPYNGRCQSNA NEYKAPLEMVDITCEDWLDEGSYSTRDETRDRANKEPLRYKYETKTMRKDAQNVTEVVSATLDEGGINDIGHMHLKIYIC L |
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| Protein ID | pfu_aug1.0_12.1_36211.t2 |
| Definition | - |
>pfu_aug1.0_12.1_36211.t2 MEAFSFGTYLLTLNLTPTSGSSATKEVILFYEEPIIGFAIYRYPYAPLNEEVHFNVTFTNASNVETEWFLDTNDTYLLRH DGQPRSFLQNFTFTVPGDHNVTVVAANTVTRTFDSMIVSAYYRLNGFDITTENRTVDPLDPVIFNVTLSPTADLPMGSLK LNLSYGDGTDENINLDSVMSNLQGSGHTVQHYYSQGYYDVTATIYSEIDSVNFTMRVSVWENVTLSMSSVEISAVKEEIT FNFLNSPFSATLYLIDFGDENTVSNNVTDWTQAYETIILSHAYITDGIFNVTMRAWNPEYSSHSSYLITVQHPIPSENIT VTAVRDTIPIPNGLLELSLVLKEDNPSPTDVLCTFNFVDETIFNISTSIIYNVPVTQYYTYNSTGSRTVSIDCQNLVSTM RKDVMVDVFFMLNGFDVLASEGTVGTNEQALFSVKLSPNANLSMGTLNMNISCSINCLKKTAITNMINIITQCSQCTRQV VYSWRLFNADSNVEDTDFSSKTLTGLGLASVVIKANTLEPDRRYSLKLTARYADSTVETFQTHEFLTNFPPYNGRCQSNA NEYKAPLEMVDITCEDWLDEGSYSTRDETRDRANKEPLRYKYETKTMRKDAQNVTEVVSATLDEGGEASAMGKAVQMGDI IFNYVVQVWVYVYDYYGDSNSTYFSITVRPDDAVSGTPDPEAVKQMFSKFDDVVEKTLKGGNAMAAVGLCGSMASVLGPP DSKTKGLSNTLKDSVVNTRTLGLLKASDAQKISRNLEAIVSNPGYISDEVTLNGANVSEKIIEKVRSLTETIPFPVGEIQ SIEESVSGTAASVDKILGNLMPDVIVDVNENFTVDSLYDQLLLDEADTIAQMRASDNYTEDDITAYEESLRNQSVELYDQ KIQQRETMLAKANSANDSVPLLMNSIGSMYEVKLKLTEVGANRSEIIRDSMKVAVEKVTLDMLTERNGTEEPLGGVKLGF LLNGTGSGNDISIKQSVFEKPPYIGGGNVGSLTSKAIQIDVSDEDIVPEASIPNSNIVHARVITPTYTSGDPEGMFYIRY EIRNDDDSTMIYLKPDDLDPSGSGGTLYHLYLQLDVLPTTASNLFNQLLSLADWDDDYGLKVIIPSMPKGKYYIGFKPQE VIVAKKRRRKRSATALTTTPATNSSVQTGSNVSLVMTTTGCRSWDDAQQSWVSNGCQVLPFSTVNETVCRCPRQSGGIVF ATTFYTAPNTIDFSTVFSKFDLSNASVYGTCLGIIVIWIIAVVLLRRQDKKDQEKWAIHFLSDGDCKDSYFYMITVETGM RRGGGTKSNVSFVLTGDDGDTGVRALDDGIRKGFPSGSARRFFMGTKTPLGPLTYLRIWHDNSGNMSEQSWFLNQVIVDD PQERQRYVFLCDHWMALEEDDGQIERVIPLSGKENITTFNTLFFQHAQFNITENHLWLSLLMRPKRSSFTRVQRASCILA LLFLTMISNAMFFRSSDDNASADTVSMGGLKFSFSIFFVSIIGILITTPPIVIVTMIFKKCKPKPIKTKVKPSSDGTTAP VNQSSKDFNGEDLVASDHLTFPYWTAYIAWVIIGLAVVSSAFFLLLYSMQWGSSKSEEWLSSFVFSFVESLFCVDPLKVV VLAMVFSILFKRPVEDEIPKVDVEKLKEASIVVNDGSTREETYTCDYTDLTWPYPCVNSYSVFSEDEGDYCVRWTPYGGS TCASPTAVQQDKSLLAWSYTDASDIWGIPITGEYGTYGGGGYLLQFIEDGSSSQTMLERLLQNNWIDRGTRAVFLEFTVY TANVNLFLYGQFLTEFTEIGGAFTYHYVQAFRPVDSLGGMGAFSLVCYAVFIIYIIYMTVRPILKIKKDGCRKFFKDIWN WIDLVCAILSYSLIAVFGVRLNYAKQAMAKYYEELAKPNSEKDIINFQHIVVWDNVFNIILGILVFIITLRVLRILGYNR RLQEVSSVVSHASTELIGFVIVFGIIFSAYISLGFLLFTTIEEYKSLFAAWGSLTNTLIGKNSFDKMVAVSPNMAQFYYF TFVFCVLMSLATMFAAILNKSISEIKDQTKQADDEFGILDFLIKMLKSIVGIAYNPTSKPIQEPNPKAIYRGRTRGRRRK PKKRVTYKPFDDV |
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