Gene
| Gene Model ID | pfu_aug1.0_11869.1_03140 |
|---|---|
| Locus | scaffold11869.1 : 1 ... 10766 : + |
| To GenomeBrowser | scaffold11869.1:1..10766 |
| Genes list of scaffold | scaffold11869.1 |
| Synonym | pfu_aug2.0_595.1_17624 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11869.1_03140.t1 | 3 | 1 | SLS | 382 | 448 | 7.3e-07 | 28.8 | 0.00014 | 0.42 | 9.9 |
| pfu_aug1.0_11869.1_03140.t1 | 3 | 2 | SLS | 617 | 660 | 7.3e-07 | 28.8 | 5.2e-05 | 0.15 | 11.4 |
| pfu_aug1.0_11869.1_03140.t1 | 1 | 1 | Macro | 742 | 856 | 2.7e-25 | 88.5 | 3.8e-28 | 1.1e-24 | 86.5 |
| pfu_aug1.0_11869.1_03140.t1 | 3 | 3 | SLS | 987 | 1041 | 7.3e-07 | 28.8 | 0.004 | 12.0 | 5.2 |
| pfu_aug1.0_11869.1_03140.t1 | 1 | 1 | PARP | 1147 | 1331 | 4.8e-29 | 101.2 | 1.9e-31 | 5.6e-28 | 97.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_11869.1_03140.t1 | gi|297670195|ref|XP_002813272.1| | 0.0 |
Transcript
| Transcript ID | pfu_aug1.0_11869.1_03140.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11869.1_03140.t1 cagcagaaagagttttacagaggttacatagagtagatcagtcccagctgaccattcaaaggctttcttctgaccttcca aaacagctgtatgcaagtcagtacagagaacagctacagactgatcccagtcccagtacacaactacagacccatccatt gtactatagagatagagtcttggtcagaaacatcaatcctaattccacaaaggacggaataaataatgttctatcaaacc ggaccaaagtagaaatgaccagcttagattatggtgaagatcaaacaacagctttagtcttctttgatggccctattgat atagatgctctgaagaaagcctgtaactccaagccgtatgataatcagtatctgatgatagaagcagtgccggtaacatg ctgtgttatggtggagaacgtagctaatataaccactcatgacggactggaaatgtattttcagtacaaagcaggagggg gagaaatcatcaaaataaaaagagatgctgaggatcagagttgtattgtacacttccttaatccagaagttgtaactcgt gttagtcaggctgttcatgtgttagatggtaacacattgtctgttcgtccatactatgaatgcctcggggtaccagcttc tgatgaagagtcaaagttctccgtcccaaggagttttgactttgtaccggaaaatcctgtcaaaatgcagttcattgaga aatcctgtactgctgccatgaaattgaataaagaaatggatagagtacatgctaagacatcctcgaggaatggtgagaaa aagcttgaagtagattgctctctgacagcttctgttaaaagctgctataccttagctaggagatggaagcattctgtaca gaaagctctcaggtacttcttcgaggaaatcaaagtagatgagtgccatccattaaaagatgtttggaatgaagttgagg agagtttgaagaaataccaggagaggatggacactagtgatgccgtaatacatatggataaagtaaatgtgacagtgtgt gttattggatggggtgaaacacagaaggacactcttgaaacggtgaaaagtatcatctttgaaaacagtgaagagtttaa taaaaggaaaactatcattgaagaagttgttaaccttcgacccattgacatgagaattctgtctcattctcagcagattg aggatttacaagatcgctttcaaaatgtcaccatagaaatcaacagtgaaaatggggaagtctgtatttctggtttgcct atagaagtgtatgagtgcaaatccattttgatggaaacaatgaatcgtatgcagtgtgttccagttggagaattttctca gcatcgtgttgattttttgaagtcagaggctatttctagttatctcaaagagcaatttgccgagaaagattttgatggtt ttgtagagtatggtcataatggacatgtagttgtctatgcaagtaatgagtgtactggagttgagctagctcactttctc aaggatgctgtcatagaaacaccaagaagactcgatgaactctctgataaattgctgcagtcagatcaacttgctaaaga aatagaacgattagaggaggaatataacggaatggttaagataattcccatacctgaggatcattgcatcttaacccttg ttgtagcttccgaagaccaaggtgaagttcttgagaaaatagacgactttcttaccatcaatgccatagtaggggaattc ttacctctacctgcagcagtgattcaccatctgcagaaacacaaaactgctgagttacaggccatctgtgacagatatag cgcagaactagtgggtgtagaatacacttcaggtggaatctgtgttacagggacggaaaaaggggttcgtcctgctgaaa ctgacgtagctgctgtcatcaatagtattactcagaaacattttactttagaaaaaccaaatattatcaattatttgaag tcaagcaatggtgagatttgtgtggaaaaggtagaacaagctaagaaatgctcagtcagtctttactctaagggagataa ggattttatcaaagagaaggagagcatcaaggcttcatcggcagcacagagtcaatcagaggtatatgccaagtgtgatc tggatggaggacactgcatacaggccgttctttgtgacattacagagatgactgtcgatgtggtcgtaaactcggctgat agtggactaaaacttgaaggtggcttagccaggattctgtctcagaaagctggacaacaaatgcaaaaggagtgtagtga tttcatgaagaagaagaaggagaagctatctaatggtgaggtatttatgagctgctctggagctctgagctgtaaacgtg tggcgcatgccgtgggacctgcatggcaaggcggggactacaaggaagagcgccatctacgggaggctgttatatgtagt ctagaatattgtgacaaggaaggctacaggagtatagctattccagccattagtacaggagtctttaactacccactgga caaagctaccttggttataacagaagctgtgagggattatttctctgaggagaacacagattctggtataaaggaggtgc acctctgtaacatcaagcctaacgtggtggaggcctttgtggtcagtatgaaggcaagcctccccaatgtcaccgtactt caacatgaaaactcctcttggaaaaaatatgaaaaaggtacaatgaggatgaccataagccagcctggtttatctgcagt gttaaaggatatggaagtgccagataatatgagtaaagtggatttggtgttttatggagagagtaaggagaagttagagg aggcattccatcagttacaagatgacatagaggaggattataggacagcacctgttattgaggaggacgaaatcattaga tttgggaggaaagagagagctgaaatctcagaacttgagaaggaatacaatgtagaaatagagaccaactatcgcattgg gagattcaaagtgtatggtttacccaaagacatatcaatggtacaagatgaaatccacaaaatcatacaaacattttcta agagtgagcagattgaaaagagtgcgcagtatttcgctaaatttgtacagtggtaccttatcgatgagagtgtaggagaa aaacctataccgtttgatattaggatgaacttaaagctggagaaaccatatcgtaagaatgagaatgttttacttgttga gcatggagaggagagttatagagtgaattacgtgaagatggaggtccactgtgaacacgctaacgtacagcatatacttc tacgcagggtgctcagtactgaatcctcctctaagcttcccaatcactggaatgacatggctaaggaggatgatttgatg attaaaactctgtcaacaacaacagaggaattcaacagagtaaagacagacttcctgtctagtgtatccagatcactaac tactcctacaatcctaaagattgaacgtattcaaaatcgcaccttgtgggtacagtatcaagcaatgaaagaatgtcgca gttcagattttccaagcggaaagcaccttgagcgcacactttggcatgggacaacactagaggccatcgaaggcatcaac atgtacggatttaacagtcgatactgtagtacaaacacaaaagctgcacggtatggccaaggcgtatactttgccagtaa tgccacaaccagcatgcgtgacatgtattccaaaccagacgagcacgagaagaagcgtatgtatcaatgcagggtcctga ctggggaatacacagagggtaacaaagacctaacgataccacccgagagaaaaccaggacagttttatgactcagtggtg gatgatgtaaataaccctcaagtatttgtgatatttaaagatagccaagcttatccagaataccttatcactttccagtg a |
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Protein
| Protein ID | pfu_aug1.0_11869.1_03140.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11869.1_03140.t1 AERVLQRLHRVDQSQLTIQRLSSDLPKQLYASQYREQLQTDPSPSTQLQTHPLYYRDRVLVRNINPNSTKDGINNVLSNR TKVEMTSLDYGEDQTTALVFFDGPIDIDALKKACNSKPYDNQYLMIEAVPVTCCVMVENVANITTHDGLEMYFQYKAGGG EIIKIKRDAEDQSCIVHFLNPEVVTRVSQAVHVLDGNTLSVRPYYECLGVPASDEESKFSVPRSFDFVPENPVKMQFIEK SCTAAMKLNKEMDRVHAKTSSRNGEKKLEVDCSLTASVKSCYTLARRWKHSVQKALRYFFEEIKVDECHPLKDVWNEVEE SLKKYQERMDTSDAVIHMDKVNVTVCVIGWGETQKDTLETVKSIIFENSEEFNKRKTIIEEVVNLRPIDMRILSHSQQIE DLQDRFQNVTIEINSENGEVCISGLPIEVYECKSILMETMNRMQCVPVGEFSQHRVDFLKSEAISSYLKEQFAEKDFDGF VEYGHNGHVVVYASNECTGVELAHFLKDAVIETPRRLDELSDKLLQSDQLAKEIERLEEEYNGMVKIIPIPEDHCILTLV VASEDQGEVLEKIDDFLTINAIVGEFLPLPAAVIHHLQKHKTAELQAICDRYSAELVGVEYTSGGICVTGTEKGVRPAET DVAAVINSITQKHFTLEKPNIINYLKSSNGEICVEKVEQAKKCSVSLYSKGDKDFIKEKESIKASSAAQSQSEVYAKCDL DGGHCIQAVLCDITEMTVDVVVNSADSGLKLEGGLARILSQKAGQQMQKECSDFMKKKKEKLSNGEVFMSCSGALSCKRV AHAVGPAWQGGDYKEERHLREAVICSLEYCDKEGYRSIAIPAISTGVFNYPLDKATLVITEAVRDYFSEENTDSGIKEVH LCNIKPNVVEAFVVSMKASLPNVTVLQHENSSWKKYEKGTMRMTISQPGLSAVLKDMEVPDNMSKVDLVFYGESKEKLEE AFHQLQDDIEEDYRTAPVIEEDEIIRFGRKERAEISELEKEYNVEIETNYRIGRFKVYGLPKDISMVQDEIHKIIQTFSK SEQIEKSAQYFAKFVQWYLIDESVGEKPIPFDIRMNLKLEKPYRKNENVLLVEHGEESYRVNYVKMEVHCEHANVQHILL RRVLSTESSSKLPNHWNDMAKEDDLMIKTLSTTTEEFNRVKTDFLSSVSRSLTTPTILKIERIQNRTLWVQYQAMKECRS SDFPSGKHLERTLWHGTTLEAIEGINMYGFNSRYCSTNTKAARYGQGVYFASNATTSMRDMYSKPDEHEKKRMYQCRVLT GEYTEGNKDLTIPPERKPGQFYDSVVDDVNNPQVFVIFKDSQAYPEYLITFQ |
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