Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_11818.1_53747
Locus scaffold11818.1 : 48283 ... 54917 : -
To GenomeBrowser scaffold11818.1:48283..54917
Genes list of scaffold scaffold11818.1
Synonym pfu_aug2.0_612.1_07720

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_11818.1_53747.t1 2 1 Sushi 1 50 6.9e-12 45.5 1.3e-07 0.00094 19.4
pfu_aug1.0_11818.1_53747.t1 2 2 Sushi 58 108 6.9e-12 45.5 3.8e-11 2.8e-07 30.7

Transcript
Transcript IDpfu_aug1.0_11818.1_53747.t1
Definition-
>pfu_aug1.0_11818.1_53747.t1
aatgtcctgaaccttcagcgccaagtaatgggatcatatttcccggtgaaaacatcatcggatcaatacggaacgttcaa
tgtgtcaatggatatctcaatctcggtgttcctcctacaattgaatgcttcgataacaaaacatggaccaactggactgg
ctcttgtaaggcatgtgatgaccctaatagcattccacatgctgatatcagtgacggaaacgtaacagtaggaagtaaca
ggacgtatacctgtaacatcggtttcgaagacaatggagaatcccccttaataacatgcaatgactctgctatgtggaac
acgactgagttttcttgtacagtacttcgtacgtga

Protein
Protein IDpfu_aug1.0_11818.1_53747.t1
Definition-
>pfu_aug1.0_11818.1_53747.t1
CPEPSAPSNGIIFPGENIIGSIRNVQCVNGYLNLGVPPTIECFDNKTWTNWTGSCKACDDPNSIPHADISDGNVTVGSNR
TYTCNIGFEDNGESPLITCNDSAMWNTTEFSCTVLRT

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