Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_11701.1_24936
Locus scaffold11701.1 : 9159 ... 21925 : -
To GenomeBrowser scaffold11701.1:9159..21925
Genes list of scaffold scaffold11701.1
Synonym pfu_aug2.0_1352.1_08334

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_11701.1_24936.t1 1 1 7tm_1 8 238 8.0e-12 44.8 1.4e-15 1.0e-11 44.4

Transcript
Transcript IDpfu_aug1.0_11701.1_24936.t1
Definition-
>pfu_aug1.0_11701.1_24936.t1
atgtttcgtaaaaattcgcgagcatacgacagatatcgtctggtttgtaagccgtgtcgtctgaggttgaatataagaca
aaagagaatagccgtggcagtttcctacattctagcggcgatcatctgttcccctgtgttgttctacagtggaactgatg
agatttccattaacataggttctaaagaaacactggctatgccatgcaggatttaccgatatatagaaataaggacttta
atgtatatcggcttcgcttttcactttgttgcagtatgtctcggaataatttgttacgtttttgttggaagaactttatt
taagaaaactcgaagtaatgacgaacgaatcccatctcccacaacagaaacgaagggagtgacagtagatgatgccgata
tcgattcccagggtacgatagattctaatgccacaacagatcaaatcacatccttccctacatcgaaaagaaataataac
gaacgggaagagaaaaactctccgtcgaaacgcattatcagatataattttactttgatgtttatatccattttcattct
caatattaccgctagtacaatacagataattctgaggatggtttcctacaaacaaagttacctgaattacaacgacaatg
cctgggccttgagtgcattcactttattccagaggagtgggatctttgttcatgcttttgaccctttcatttatgcttat
tttgatctccgaatcagggaagaggctatgcgtttgtgttgtagatgctgtggactcaaaagaagnggactgcacccaac
gtatggcgttcgatttgcataa

Protein
Protein IDpfu_aug1.0_11701.1_24936.t1
Definition-
>pfu_aug1.0_11701.1_24936.t1
MFRKNSRAYDRYRLVCKPCRLRLNIRQKRIAVAVSYILAAIICSPVLFYSGTDEISINIGSKETLAMPCRIYRYIEIRTL
MYIGFAFHFVAVCLGIICYVFVGRTLFKKTRSNDERIPSPTTETKGVTVDDADIDSQGTIDSNATTDQITSFPTSKRNNN
EREEKNSPSKRIIRYNFTLMFISIFILNITASTIQIILRMVSYKQSYLNYNDNAWALSAFTLFQRSGIFVHAFDPFIYAY
FDLRIREEAMRLCCRCCGLKRXGLHPTYGVRFA

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495