Gene
| Gene Model ID | pfu_aug1.0_11663.1_10346 |
|---|---|
| Locus | scaffold11663.1 : 9826 ... 14390 : + |
| To GenomeBrowser | scaffold11663.1:9826..14390 |
| Genes list of scaffold | scaffold11663.1 |
| Synonym | pfu_aug2.0_4073.1_12577 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_11663.1_10346.t1 | 2 | 1 | DNA_pol_B_2 | 399 | 580 | 3.2e-36 | 124.9 | 3.7e-23 | 5.5e-19 | 68.1 |
| pfu_aug1.0_11663.1_10346.t1 | 2 | 2 | DNA_pol_B_2 | 726 | 881 | 3.2e-36 | 124.9 | 2.2e-21 | 3.3e-17 | 62.3 |
Transcript
| Transcript ID | pfu_aug1.0_11663.1_10346.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11663.1_10346.t1 atgtttgatgatctactagcggatataaaagagatgggaggaatagaggaagacgataagatggggatggaaatcgatca tccggcattaacggaaaaattaggttccatccactacccgtttaccctggccaaaaattacgattcggaattgattttag gagagatcgaaaggattcaacagagtaatttaaaattcgtcctgaccgacggaaaaacgcaaataagagtgagttccttt aaatgtcccaaaggaagtggaacactcaaacctttcgattcaccttatctcttttctcctaaatctaattgtttcttcca atctttggcctacggattaggatatacggccactaaaaaaagggggaacgaattaaaacaagaatttcgatgtacagaca tcgtggccattcacaaattaaaagatctagctgcagaaatatccgataaatacgggatattactcaaaatttacgtagag gagggaagacgatgcatcattaatgcattaagatatcaccctaaaatcgtacgtattttattcatggaagaccattattt cctaataaaaaagattcataaattatacggtcaaaaattcaccaattactgcgaatattgcgaagttccctacgtccgaa aacgagaccattttttgaaatgttataacaggtgtaaaaaatgcggaactttaagaaaaaactgtatgtacggcgaaaaa aagacgattaaatgcgttcactgtaaaacgacattttatacgacggaatgttattcatcgcatcattcgtatcattgtgt gcattttagtacgtgtgaaaaatgcggtctttatggcagaaccgatcacatcctaaattttcattattgtcttagaataa gctgtccaaaatgtaaaaaaagtattctgagaggcgaggatcatgaatgtttcatggcggttataaaaaaagattcggaa aaaaaccaacatcaattcaggtacgtctttgccgactttgaatcgcgacaagacgagggaattcatacagtaaatttcat cgttagtcaaagagtgtgttccgtgtgtatgagcgatgaagacatgaatttaccctgtacgaactgttctaactggaagg aagaacgtatatttaaaggagatgattccttaaacactttcttgacttatctattttcacaacggacggcttgtacggtc atcatgcataattttaagggatatgacggacaattcattcttagacatatcttagtctatatcggaaccgttccttggaa gataattactcagggtcagaaaataattcacatggaacacgaatgcaaaaggtttgtagattcgataaatttcattcctc tagccttaaaaaatttcggtaagagtttcggattgaggcaggaaaagggttactttcctcacttatttaatagaaaagac acccaatcttacgtcggaatcatccctccgatgtataatttctgtccggaaagtatgaacagtacggatctcacaaaatt tcatgaatggtataaacaagaaatgaataaagaatatgatttcgaaagagaaatgcaaaaatattgtaagaatgacgtcg acgtcatgcgtttaggatgtgctaaattcagatcgatcatcatgcaaatgggtaaaatagatccttttgtcgactgtatt accgttgctagtgttgctaataagattttccggaaaaattatctgaaagaaaatgaggttgcatgcattccggatgcggg gtacgaaaaaaagaaaagactgtattccatcaaagcactgacgtggttacactcgttacccggttcggataaaatacaaa aagcggattctctctacggtgaggtcaggttgaaattcgacgacggtacttcttattacgtcgacggaatggattcggac acggtttacgaattttacggttgttattggcacggttgttggcattgttatggagaaaccgaaaaggtaggaaggaacgg tcttaaaatgagagaattgtatcaaaggacgatgcaaagggaaaataagatcaagttgaaatacaaagtgaaacacattt gggaacacgaattcgatttaatgatgaaaaaaaacgaatcgttaaaagaattttatcaatacatgaagagaaattgcgtt ttacctattaatccgagagacgcactttttggaggtagatgcgaagcctttaaattatgtgtcaaagatgagcccatgtc ttacatagatgtatgttctctgtatccatacgtcttagccaatagggaatttcctttaggacatccggaaattcttaaaa gacctaccggtgatgttaaatcgtatttcggattgataaaatgtaaaatattaccgcccaaagatctttacattccgata ttaccggccaagattaacggtaaattaatatttaccttatgtcagacctgtgccgaaaggaaaaataataattgtacgca ttcggaagaggaacgctgtttaatcggtacctggtgcagtcctgaaataaataaagcgcgtgaaaaggggtatatcattc gggaattatacgaagtttggcactggaaagacgtatccaaagatatctttagaggatatatcatgacattttttaaagaa aaagatggaaagtag |
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Protein
| Protein ID | pfu_aug1.0_11663.1_10346.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_11663.1_10346.t1 MFDDLLADIKEMGGIEEDDKMGMEIDHPALTEKLGSIHYPFTLAKNYDSELILGEIERIQQSNLKFVLTDGKTQIRVSSF KCPKGSGTLKPFDSPYLFSPKSNCFFQSLAYGLGYTATKKRGNELKQEFRCTDIVAIHKLKDLAAEISDKYGILLKIYVE EGRRCIINALRYHPKIVRILFMEDHYFLIKKIHKLYGQKFTNYCEYCEVPYVRKRDHFLKCYNRCKKCGTLRKNCMYGEK KTIKCVHCKTTFYTTECYSSHHSYHCVHFSTCEKCGLYGRTDHILNFHYCLRISCPKCKKSILRGEDHECFMAVIKKDSE KNQHQFRYVFADFESRQDEGIHTVNFIVSQRVCSVCMSDEDMNLPCTNCSNWKEERIFKGDDSLNTFLTYLFSQRTACTV IMHNFKGYDGQFILRHILVYIGTVPWKIITQGQKIIHMEHECKRFVDSINFIPLALKNFGKSFGLRQEKGYFPHLFNRKD TQSYVGIIPPMYNFCPESMNSTDLTKFHEWYKQEMNKEYDFEREMQKYCKNDVDVMRLGCAKFRSIIMQMGKIDPFVDCI TVASVANKIFRKNYLKENEVACIPDAGYEKKKRLYSIKALTWLHSLPGSDKIQKADSLYGEVRLKFDDGTSYYVDGMDSD TVYEFYGCYWHGCWHCYGETEKVGRNGLKMRELYQRTMQRENKIKLKYKVKHIWEHEFDLMMKKNESLKEFYQYMKRNCV LPINPRDALFGGRCEAFKLCVKDEPMSYIDVCSLYPYVLANREFPLGHPEILKRPTGDVKSYFGLIKCKILPPKDLYIPI LPAKINGKLIFTLCQTCAERKNNNCTHSEEERCLIGTWCSPEINKAREKGYIIRELYEVWHWKDVSKDIFRGYIMTFFKE KDGK |
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