Gene
| Gene Model ID | pfu_aug1.0_1152.1_15373 |
|---|---|
| Locus | scaffold1152.1 : 1 ... 5715 : - |
| To GenomeBrowser | scaffold1152.1:1..5715 |
| Genes list of scaffold | scaffold1152.1 |
| Synonym | pfu_aug2.0_233.1_10475 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1152.1_15373.t1 | 1 | 1 | Ku_N | 1 | 103 | 7.9e-17 | 61.4 | 1.4e-20 | 1.0e-16 | 61.0 |
| pfu_aug1.0_1152.1_15373.t1 | 1 | 1 | Ku | 109 | 222 | 1.1e-25 | 90.2 | 2.1e-29 | 1.6e-25 | 89.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1152.1_15373.t1 | gi|115618058|ref|XP_001180453.1| | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| >Adult tissues | |
| Dshape | 1 |
| maleGonad | 2 |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_1152.1_15373.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1152.1_15373.t1 atgttctcaaacagtccacagaaagtgaattcaaagagaatcatgttattcaccaacaatgacaacccgcacgcaggaaa tcctcagttacagagacaagcgaagacaaaggcaagtgacttgtacgagacaggaatagacttagaattgatgcatcttc agaaatctggcgaaagctttgatgtcaacaagttttacaaggacctcctgtacacagcagatgatgagttgacagacctt ccggatccttcggagagaattgatgatttactcacaagggtaagatccaaagaccacaagaagagagcccaaaggcggat tccactgtcattagggccgggaatggaattaggtgtaggggtgtacactctagttaggccttgttataaaccatccacag taaaactgtcaaggaacacaaatgaggagctgaaaacccactccaaggtttatgtgcaggacacaggagaagttttgatg cctcaggatctgaagaaagctcaaacttacgggggtaagcagatatgttttgagaatgatgaagtcatagaaattaagaa atttggagaatctgggttccatttgatgggatttaagcccaccagctgcttaaagaaatactatcacgttaaacctgcac agttcatatatcccgatgaaacgacaccgctgcgcactataatttgccgccgacgtttttattgcaacttcagaaaaaaa tatacgccgtgtctcatcctcgatcgtcgataa |
|
Protein
| Protein ID | pfu_aug1.0_1152.1_15373.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1152.1_15373.t1 MFSNSPQKVNSKRIMLFTNNDNPHAGNPQLQRQAKTKASDLYETGIDLELMHLQKSGESFDVNKFYKDLLYTADDELTDL PDPSERIDDLLTRVRSKDHKKRAQRRIPLSLGPGMELGVGVYTLVRPCYKPSTVKLSRNTNEELKTHSKVYVQDTGEVLM PQDLKKAQTYGGKQICFENDEVIEIKKFGESGFHLMGFKPTSCLKKYYHVKPAQFIYPDETTPLRTIICRRRFYCNFRKK YTPCLILDRR |
|