Gene
| Gene Model ID | pfu_aug1.0_1080.1_00596 |
|---|---|
| Locus | scaffold1080.1 : 28956 ... 58011 : + |
| To GenomeBrowser | scaffold1080.1:28956..58011 |
| Genes list of scaffold | scaffold1080.1 |
| Synonym | pfu_aug2.0_1847.1_25176 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1080.1_00596.t1 | 1 | 1 | EF-hand_like | 41 | 104 | 6.4e-11 | 42.1 | 6.9e-14 | 2.5e-10 | 40.1 |
| pfu_aug1.0_1080.1_00596.t1 | 2 | 1 | PI-PLC-X | 103 | 235 | 0.0 | 180.2 | 0.0 | 0.0 | 180.2 |
| pfu_aug1.0_1080.1_00596.t1 | 3 | 1 | PI-PLC-Y | 373 | 394 | 3.4e-06 | 27.0 | 0.0015 | 5.7 | 6.9 |
| pfu_aug1.0_1080.1_00596.t1 | 3 | 2 | PI-PLC-Y | 394 | 420 | 3.4e-06 | 27.0 | 2.9e-08 | 0.00011 | 22.1 |
| pfu_aug1.0_1080.1_00596.t1 | 1 | 1 | DUF1154 | 628 | 668 | 1.5e-10 | 40.5 | 4.0e-14 | 1.5e-10 | 40.5 |
| pfu_aug1.0_1080.1_00596.t1 | 3 | 3 | PI-PLC-Y | 664 | 691 | 3.4e-06 | 27.0 | 0.62 | 2300.0 | -1.5 |
| pfu_aug1.0_1080.1_00596.t1 | 2 | 2 | PI-PLC-X | 682 | 697 | 0.0 | 180.2 | 0.5 | 1900.0 | -1.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1080.1_00596.t1 | gi|147900969|ref|NP_001081169.1| | phospholipase C, beta 3 (phosphatidylinositol-specific) [Xenopus laevis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 3 |
| >Adult tissues | |
| mantle | 2 |
Transcript
| Transcript ID | pfu_aug1.0_1080.1_00596.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1080.1_00596.t1 atgtatggcatcggaaatatgttatctatgtataaatgtttgcagaatgagaccattgatccaggaaagttcacatttga agacttcttcaacttttaccgtcatcttgtgggtagaacagaggtggacaaagtatttgatgaagttggggctaagaaga agccataccttacagttgaacagtttgttcagtttctcaacaaagagcaacgtgatccacgacttaacgagatcctgtac ccctactatacaatcaagcaggcacaggagtttatcaacttgtatgaaacaaagaatgggatggctgcaaaaggtcatca gttaactggtcgttcctcagtggagatgtaccgtcaggtgttattaagtgggtgtcgctgtatagaactggactgttggg acggtaggaatgctgatgaagaaccagtaataacacacggctacacaatgtgcactgaaatctcattcaaggaggtcatt gaagccattgcagaaagtgcattcaaaacatcagaatatcctgtgatcttgtcttttgaaaaccattgctcgcacaaaca acaggccaaaatggctgctcattgtcgcaatatatttggagaaatgctattaacagaatgtatggacggctttcctttgg aggtagatattcctttgccaagtccacatctgttgaaaagaaaaatcatagtgaagaacaagaaaaaacattttcataaa gaaaaggtcaaagttcagaagacttctagctcaatcaaacttaaagtagacggcatttcactgaacggtgaaacaaaagg tggagggacaggggatgagggcggagggactttaggcaataatgaacctctgtccactgtcaaagaatgcgagaatgagg aaagtggacatcaaacagtgacatcaccgagtcagtcggcgccccctgccatgacatcaccagataggaaaccaagggag agtatctcagaagatgccttgagtgacggagcaccaaatgatttagatgaacatgggtctgactctgaatccagtgaatc agaagatgacgatgctgaagtagcaaattttaagaaagaaaagggtactgcagggaaagaagcagaggcagcgttagaaa tgtctgctttagtaaactatgtacaacctgtacatttccattcctttgaaagctcagaaaatacagcaatgcaacttaac ctgggaatatttgaatacaataaccaatcagggtatatattgaaacctgacttcatgagacgtacagatagacgttttga cccttttgcagaatcgattgtagatggcattgttgctggaatgctatcaatcagggttgtactacccaatctagctgtga taaggattgcagtctttgatgagaataacaagatgctaggtcacagagtactgcctgtagaaggcctaaggccaggatac cgacatatagcaatgcgtaatgagtgtaacctccctctccttttgcccactgtttttgtacatattagtgtgaaagatta tgtacctgatgaaatgtctgaatttataatagccttgagcaatccaatagcatatttatctgagatggaaaagcacagtc agcagttagctgtgctggaggaccctgatgatcctgaaatacccttgaccagtgagaccagtccaccaataaccaatggt tcacccgtacgaagggaaagtagcaacattccaactgattcagtaacaaatgggggaatacgaccaacaaaacccaaaga aggaataatcacaaaacccagtataaccagcaacagtagtgcaggtagtgttcctcctcatcctccattgaaatccatta catcagaagctgtgtcttctcaactgaacgaaccagagattttgcagcctacacctttgaaggaactcaaagagcagaaa ccgtacttcaaagttttggccaaacgagagaaggagctagaaactcttagtaagaaacatgaaaaggcgcgagaaaatat gaaagaaattcatgaaatgcaagaagagcgcttgatgatacagcaggttaaggccaaaacaacaatggaaaagctgcatg ctaaaatcctgaagaaggccttgaagaatggcaatattgagcaggtcgaacaagcaaaccaacacgaccatcaggcctta ttacgtgaccatgaggaaaagtggaagatgaagatattaggcatgaatggaagtgtaaatttattgcgatacaatatttt caaatacttttga |
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Protein
| Protein ID | pfu_aug1.0_1080.1_00596.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1080.1_00596.t1 MYGIGNMLSMYKCLQNETIDPGKFTFEDFFNFYRHLVGRTEVDKVFDEVGAKKKPYLTVEQFVQFLNKEQRDPRLNEILY PYYTIKQAQEFINLYETKNGMAAKGHQLTGRSSVEMYRQVLLSGCRCIELDCWDGRNADEEPVITHGYTMCTEISFKEVI EAIAESAFKTSEYPVILSFENHCSHKQQAKMAAHCRNIFGEMLLTECMDGFPLEVDIPLPSPHLLKRKIIVKNKKKHFHK EKVKVQKTSSSIKLKVDGISLNGETKGGGTGDEGGGTLGNNEPLSTVKECENEESGHQTVTSPSQSAPPAMTSPDRKPRE SISEDALSDGAPNDLDEHGSDSESSESEDDDAEVANFKKEKGTAGKEAEAALEMSALVNYVQPVHFHSFESSENTAMQLN LGIFEYNNQSGYILKPDFMRRTDRRFDPFAESIVDGIVAGMLSIRVVLPNLAVIRIAVFDENNKMLGHRVLPVEGLRPGY RHIAMRNECNLPLLLPTVFVHISVKDYVPDEMSEFIIALSNPIAYLSEMEKHSQQLAVLEDPDDPEIPLTSETSPPITNG SPVRRESSNIPTDSVTNGGIRPTKPKEGIITKPSITSNSSAGSVPPHPPLKSITSEAVSSQLNEPEILQPTPLKELKEQK PYFKVLAKREKELETLSKKHEKARENMKEIHEMQEERLMIQQVKAKTTMEKLHAKILKKALKNGNIEQVEQANQHDHQAL LRDHEEKWKMKILGMNGSVNLLRYNIFKYF |
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