Gene
| Gene Model ID | pfu_aug1.0_10703.1_02962 |
|---|---|
| Locus | scaffold10703.1 : 26896 ... 41683 : + |
| To GenomeBrowser | scaffold10703.1:26896..41683 |
| Genes list of scaffold | scaffold10703.1 |
| Synonym | pfu_aug2.0_1.1_03330 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10703.1_02962.t1 | 1 | 1 | RRM_6 | 5 | 60 | 4.9e-10 | 39.2 | 1.3e-13 | 9.8e-10 | 38.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10703.1_02962.t1 | gi|91094045|ref|XP_968644.1| | PREDICTED: RNA-binding protein 12 [Tribolium castaneum] | 1.0e-29 |
Transcript
| Transcript ID | pfu_aug1.0_10703.1_02962.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10703.1_02962.t1 atgtcggtgatcataagacttcagggtttaccatggagtgccagtgcagcggacatccgccagttcttcaagggactcaa tatcccgccagggggcgtacacatcatcggcggcgagaagggcgacgctttcatcgcttttgccacggacgaggacgccc gacaggccatgatgctaaatctcggacagattggtaccaatcaagtcatgctgtaccttagtagtaaaacacaaatgcaa aacgttatcgccgaagctagaggtcaaagtgcagctccggcaccccccgtgtcggctgtttcctccgcgcctccagcgca acaacgccccgctgatccctatcaacagcatccaactagcatggcgaccaacacatcctactcgcaatatccatatggtc aacaacaacagatgccagcccagacgactttagccagtagaaatccctatgatctacccggcctcggatcagagtatggc catcagcaagatcctagtttccaacaacaacagcaaccaccgcaacatcagcccaaccagcaacaacagtggcccggatt acaaggagctgccccaaatcaatatgacccatacggcacagctttaggacagaacaatttacagaaacaaaatgacatgt caaagcaacccgaccctagcaacctagaagcagacagtatgccgcgatctatgagtctatttgacagaaggaaaccacct caaaataaacctaactttgaagatgaatctccaaaagggatggacgatatgcgaaaagacaggtcatcgctggcgtcttc tcaagactcgttgaatctggacggaagtgtgaagagtatgtcatctaatgacgatagatacgggcggggacaaggcgata accgacccccataccagggctacgatcaggggatgaaccaacgaccgatgggtgacccagacgatagatcacgaagtcaa ccccaggggaatcccttcggaatccttaatactgacatcggaggccagttttccaatcctaatttctgggaaaagattgc tgcaggagttagttcagtacccgatgtcaaaacacaacaatatccacccgtatcgaacaacgaccagtcgatgaggagcg accagactatgaggagcgaccagtcgatgaggagcgaccagtctatgggaggcaatcagggaatgagaagcgaccagact atgcacggaggcagtcagggaatgaggagcgaccatagttttggtgacatgagggacagatcctacgatagtcgctcggg cgcaggtgatcagtttcaaccttatggaaacccgcaaagtgacacgggacgcttgcctccggatatgggacgtctgtcgt cggatatggctcgtcagcaacctgatttgaaccgaccaccaccggatatggcacgaccgccacctgatatgggtcgtccg ccacatgatatggcacgtccgccaccggacatgggtcgtccgccacctgacatgtcgcgtccgccaccggatatggcacg cctgccaccggatatggcacgcctatcacaggacaatgtccaaccggatatgggtcggcaaccatcagatgtcggacctc caggaaccgggaacatacgtcaaggattggaagtcggacaccctccgtatgacgatctacggttaggtgatagtacgcca gacaatcgaatgaacgacagatacgcacgcgggcaaaatgatccgtactcaaattctatgcgacccgccgatagagatcc ttattcccgaccgccatatgatagagattttgggaggggtccctatgatagaccgccgtctgttgatgaaaggtctccat tcgacaataatcctccaagaagcgatcgtccatcgttgctgggtgatcgaccgcgtgatgcggatggaactcccgcaaaa ccactttacaacgcacctccaccaagagacgatgtgtcgccttataaccgacctccacaacaaggtgacatggatagacc tgggacaaacagaccgcctcacatggacgaacgttcaccctacgacagagggcagcctatggatccgagtagaccgcacg atcgacccccttatgatcggtctccgtttgatagaagcaatccacctgacagtcgagatcgcggaccgtacggcgatcaa cgctaccctgatgacaggaattatggtcgacgtgatgacaattcttttgacatgtacggtcgaagaccattttaccctgg acgagatatgggacttggtaatcgtgacatgggtcctagcagtcgagatttgggtcctggtagtcgagatatgggtcccg gaaatcgagacatgggccctggtagtcgagacatgggtcctggcagtcgagatgtgggccctggcagtcgagacatgggt cctggcagtcgagacatgggtcctggcagtcgagatatgggtcctggcagtcgagatatgggcccaggcagtcgagatat gggtcttggcagtcgagacatgggtcctggcagtcgagatatgggctctggcagtcgagatatgggtcctggcagtcgag atatgggcccaggcagtcgagatatgggtcccggcagtcgagatttaggatctgttagccgagattcgggaaatcgtgat gttgatcaagatagtagaatccggccagattttgatcgaatgaatcgtgatcgattttcaagtgacagggatacatctat gaacgatagagagagatttgggcgatatccaccaggccaaggaccgcccagtggggatatgccacctaggagggacggtc ccccaataccatccatcctggacacgcctatgaacagaccccctggaatacgacctggtatggatcgcttacctctacat cagattgataataggagtcatattaggtttcaaggaatggagatccgaggacccagaccgttaagaccagtcgtcccggg aatgtttacagatccaaaacaggatcaggatatcaggagtgatagaaaactacccttaccgccaagcgctgctgccatcc aggcaaacgataaaccaaaagatctgccgaaatcaggttccgaagagaaaaagagtgacgataaatcccgagagaagaaa gatgacgatcagtcggatagtcgtaatcgtgataaagaccgagactcccgaaggaaaatctaa |
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Protein
| Protein ID | pfu_aug1.0_10703.1_02962.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10703.1_02962.t1 MSVIIRLQGLPWSASAADIRQFFKGLNIPPGGVHIIGGEKGDAFIAFATDEDARQAMMLNLGQIGTNQVMLYLSSKTQMQ NVIAEARGQSAAPAPPVSAVSSAPPAQQRPADPYQQHPTSMATNTSYSQYPYGQQQQMPAQTTLASRNPYDLPGLGSEYG HQQDPSFQQQQQPPQHQPNQQQQWPGLQGAAPNQYDPYGTALGQNNLQKQNDMSKQPDPSNLEADSMPRSMSLFDRRKPP QNKPNFEDESPKGMDDMRKDRSSLASSQDSLNLDGSVKSMSSNDDRYGRGQGDNRPPYQGYDQGMNQRPMGDPDDRSRSQ PQGNPFGILNTDIGGQFSNPNFWEKIAAGVSSVPDVKTQQYPPVSNNDQSMRSDQTMRSDQSMRSDQSMGGNQGMRSDQT MHGGSQGMRSDHSFGDMRDRSYDSRSGAGDQFQPYGNPQSDTGRLPPDMGRLSSDMARQQPDLNRPPPDMARPPPDMGRP PHDMARPPPDMGRPPPDMSRPPPDMARLPPDMARLSQDNVQPDMGRQPSDVGPPGTGNIRQGLEVGHPPYDDLRLGDSTP DNRMNDRYARGQNDPYSNSMRPADRDPYSRPPYDRDFGRGPYDRPPSVDERSPFDNNPPRSDRPSLLGDRPRDADGTPAK PLYNAPPPRDDVSPYNRPPQQGDMDRPGTNRPPHMDERSPYDRGQPMDPSRPHDRPPYDRSPFDRSNPPDSRDRGPYGDQ RYPDDRNYGRRDDNSFDMYGRRPFYPGRDMGLGNRDMGPSSRDLGPGSRDMGPGNRDMGPGSRDMGPGSRDVGPGSRDMG PGSRDMGPGSRDMGPGSRDMGPGSRDMGLGSRDMGPGSRDMGSGSRDMGPGSRDMGPGSRDMGPGSRDLGSVSRDSGNRD VDQDSRIRPDFDRMNRDRFSSDRDTSMNDRERFGRYPPGQGPPSGDMPPRRDGPPIPSILDTPMNRPPGIRPGMDRLPLH QIDNRSHIRFQGMEIRGPRPLRPVVPGMFTDPKQDQDIRSDRKLPLPPSAAAIQANDKPKDLPKSGSEEKKSDDKSREKK DDDQSDSRNRDKDRDSRRKI |
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