Gene
| Gene Model ID | pfu_aug1.0_10623.1_31944 |
|---|---|
| Locus | scaffold10623.1 : 686 ... 16428 : + |
| To GenomeBrowser | scaffold10623.1:686..16428 |
| Genes list of scaffold | scaffold10623.1 |
| Synonym | pfu_aug2.0_695.1_17740 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10623.1_31944.t1 | 1 | 1 | NIDO | 125 | 198 | 1.7e-09 | 38.2 | 5.7e-12 | 5.3e-09 | 36.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10623.1_31944.t1 | gi|260816531|ref|XP_002603024.1| | hypothetical protein BRAFLDRAFT_84760 [Branchiostoma floridae] | 9.0e-11 |
Transcript
| Transcript ID | pfu_aug1.0_10623.1_31944.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10623.1_31944.t1 atggtatccaaagacggattagtcgggttctcacctcaagctgcgtacaagaatactgtatactctaagtaccagactca gtatgtagcctctaacgattacccctttgctgcagccttccattttgcggctgcttctcttggctctgttacatcagctg gtgaaacctaccgaggagttacgaggtacagacaaattctttcagccaatgaggaaagtcgtaacatttcaaatttcata cgagcagcgtttcccggtcaggaccagttccaagctacgtacgtcctcgtggttacgtggagagatgtatttgacttgag ggaacagtctgtagtaaactgtcagtaccagacgggaccaaatatatgtaagacaaacacgttccaacaagtgatggtga cagatggatcatcaagctttgcaatatttaattatctgaaaactgacgtcaaaacctcccctacaacacaatcaggattc aacggcggaaatgggcgtggttggtcagaagcaatcaaaagcggttcactacaaacggcaaatgcaagccaaggaagcga tgtagtgggacgatacgtgtaccagatagatgatactgttatatacaaaggagggtgtactccacaaaaatctaacatgg cgatggtttatggtttatcacacgtaatgacgtttgatggatcttcgtaccgtgtgtgtggagagggagactttgtgtta ctcaaatcacttgagatgacaattgaagggagatttcagaagtctaagttcctcacaggaacacaaaacaaaagtgtcat actgacagatgtaggcataaagtttaatacagaaaaagttgaaatccgactcagaggtccggatgttgacagatcccaaa ggcttattgatgtacttgtcagtgataaattcatcctttttgaccaaacacctatgaggtggcaagattttaaaggggcg atcaaagaaaagaagaactccattgtgcctttcacccttctagctgtgaatgactccagtatgtgtaatgtacctatgtc cggcactggctatggtttctgtggagggaataaagactgtgaatttgacatgtgggagaccaacaaccgaacgtcatgtg gactcctggacgtcccacgtagtagaaagtccagcaacaattatacactaggcagcacagtgacagtcactaactgtagg gtgggaacattgagtggggacaccacctacacgtgtacagctaacggtgaagaaaaacaacaatggagtcctacggttac tgcaagctgtgcagacactctggaggacgcacagactacactcattgttgcaatagtagttccagtagttgttgttttcg tcatcatcgtcataatcatcgctgtcatcatgaaaagaagatctggaaaaaacgaaagagctgcaaacaaaaatgtcaat cctgaagaaaagtga |
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Protein
| Protein ID | pfu_aug1.0_10623.1_31944.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10623.1_31944.t1 MVSKDGLVGFSPQAAYKNTVYSKYQTQYVASNDYPFAAAFHFAAASLGSVTSAGETYRGVTRYRQILSANEESRNISNFI RAAFPGQDQFQATYVLVVTWRDVFDLREQSVVNCQYQTGPNICKTNTFQQVMVTDGSSSFAIFNYLKTDVKTSPTTQSGF NGGNGRGWSEAIKSGSLQTANASQGSDVVGRYVYQIDDTVIYKGGCTPQKSNMAMVYGLSHVMTFDGSSYRVCGEGDFVL LKSLEMTIEGRFQKSKFLTGTQNKSVILTDVGIKFNTEKVEIRLRGPDVDRSQRLIDVLVSDKFILFDQTPMRWQDFKGA IKEKKNSIVPFTLLAVNDSSMCNVPMSGTGYGFCGGNKDCEFDMWETNNRTSCGLLDVPRSRKSSNNYTLGSTVTVTNCR VGTLSGDTTYTCTANGEEKQQWSPTVTASCADTLEDAQTTLIVAIVVPVVVVFVIIVIIIAVIMKRRSGKNERAANKNVN PEEK |
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