Gene
| Gene Model ID | pfu_aug1.0_10607.1_39082 |
|---|---|
| Locus | scaffold10607.1 : 32848 ... 42555 : - |
| To GenomeBrowser | scaffold10607.1:32848..42555 |
| Genes list of scaffold | scaffold10607.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10607.1_39082.t1 | 6 | 1 | LRR_4 | 91 | 103 | 9.0e-06 | 25.1 | 0.28 | 4200.0 | -2.5 |
| pfu_aug1.0_10607.1_39082.t1 | 6 | 2 | LRR_4 | 157 | 176 | 9.0e-06 | 25.1 | 0.0025 | 37.0 | 4.0 |
| pfu_aug1.0_10607.1_39082.t1 | 6 | 3 | LRR_4 | 228 | 261 | 9.0e-06 | 25.1 | 0.0004 | 6.0 | 6.6 |
| pfu_aug1.0_10607.1_39082.t1 | 6 | 4 | LRR_4 | 253 | 307 | 9.0e-06 | 25.1 | 7.2e-06 | 0.11 | 12.1 |
| pfu_aug1.0_10607.1_39082.t1 | 6 | 5 | LRR_4 | 288 | 326 | 9.0e-06 | 25.1 | 0.00013 | 2.0 | 8.1 |
| pfu_aug1.0_10607.1_39082.t1 | 6 | 6 | LRR_4 | 317 | 360 | 9.0e-06 | 25.1 | 0.00015 | 2.3 | 7.9 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 2 |
| egg-4cell | 1 |
| >Adult tissues | |
| maleGonad | 3 |
Transcript
| Transcript ID | pfu_aug1.0_10607.1_39082.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10607.1_39082.t1 atgtggccattattgtctctgaaaaggtcacagctcaaggccaagtatttaacaaagctgatcaaagatggaacaggttc agagttcagtagactagcggagacagtgctgccgaaagtacagaatgaactaccgaaaatacttaacgacctcctgaacc atgagatggttaaaagtgcacaattctctatacacatcccatcaggagaggaaatggaggtgaagttagacagcgtcaag ttcagcacaagtagtacgttcttcatagactacctgatctgtaattgtctgaggtcaatcactcctatcaccatctctgt atctaacatctatatcaagtcagacctgtctttaacagaggatgttatggactcccttgctccattcattgtgttcagta gccaggattcaaagtcccttgatggtatatcactgaagcagctggaggagggaatattcttcttcatgtcacctgatctc cgtaggtttcatcgtttaaggagtttagacatccaggactgtaatgtgtatttattatccggtcgcacacgtagtcagac ctttcacagaatgcagttagtgagattacttaattcgtttgactgtctacacagacttgatattagttttaactacttac tagggtgtctcggagaactcttggaagcgttacggcacccgttagaatacctcagtgtgcgaggctgtgatctaaacgaa catgacttggaatgtttagccagctcatctcatagcaaatctctcagggaacttaacctcagtaaactctgccagttttc catatataacatggacagaatatcaccctcatatctccttaaaatcatccctcagttcaccaatgttgccattctaaatc ttgctcaaaatcaccttccagattcctccattccagacttttgtaaaaccatctcaactcatctcaaacgtctggtctat ttggacattgcgggtaatatactcaatgaaaacagtctgacagagttgatacatagtgttggcaaggtgaaaccgttcca gttgttcagaattacgtgttcaaataacttattagagggaatgccccttgacgcttatcaagtgaaccaactaactgcag gtctcaggaggaagttcatgaacatctggaaagacatgggacgcacagacatacatctagacattgtccgtttgtcatat gcaatttttgtagaccttcttgatatattcaacgattga |
|
Protein
| Protein ID | pfu_aug1.0_10607.1_39082.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10607.1_39082.t1 MWPLLSLKRSQLKAKYLTKLIKDGTGSEFSRLAETVLPKVQNELPKILNDLLNHEMVKSAQFSIHIPSGEEMEVKLDSVK FSTSSTFFIDYLICNCLRSITPITISVSNIYIKSDLSLTEDVMDSLAPFIVFSSQDSKSLDGISLKQLEEGIFFFMSPDL RRFHRLRSLDIQDCNVYLLSGRTRSQTFHRMQLVRLLNSFDCLHRLDISFNYLLGCLGELLEALRHPLEYLSVRGCDLNE HDLECLASSSHSKSLRELNLSKLCQFSIYNMDRISPSYLLKIIPQFTNVAILNLAQNHLPDSSIPDFCKTISTHLKRLVY LDIAGNILNENSLTELIHSVGKVKPFQLFRITCSNNLLEGMPLDAYQVNQLTAGLRRKFMNIWKDMGRTDIHLDIVRLSY AIFVDLLDIFND |
|