Gene
Gene Model ID | pfu_aug1.0_10514.1_24749 |
---|---|
Locus | scaffold10514.1 : 1 ... 3625 : - |
To GenomeBrowser | scaffold10514.1:1..3625 |
Genes list of scaffold | scaffold10514.1 |
Synonym | NA |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug1.0_10514.1_24749.t1 | 1 | 1 | I-set | 2 | 86 | 1.8e-20 | 72.6 | 1.5e-23 | 2.7e-20 | 72.0 |
pfu_aug1.0_10514.1_24749.t1 | 1 | 1 | Ig_2 | 2 | 82 | 2.5e-11 | 43.5 | 1.9e-14 | 3.5e-11 | 43.0 |
pfu_aug1.0_10514.1_24749.t1 | 1 | 1 | Ig_3 | 13 | 73 | 7.7e-09 | 35.9 | 6.9e-12 | 1.3e-08 | 35.2 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug1.0_10514.1_24749.t1 | gi|115681458|ref|XP_792475.2| | 2.0e-12 |
Transcript
Transcript ID | pfu_aug1.0_10514.1_24749.t1 |
---|---|
Definition | - |
>pfu_aug1.0_10514.1_24749.t1 atgccagagcagactaaggcgcctctgggtggcagtaagcggtttgaatgccgagtggtaggtttccccagacctaccgt tcaatggtttaaggacggcagagacatcacccatgacgaccgattcgagttcgacttctccattgacggggtcatcacca tggtgatccataatgtgacctttaaggaccaaggagtatatagctgtagagctgagaattcagagggatgggcagcaact gccgccatattaaatgttcgaggtacgagatcaaatcgtattagtaaatataattatgaagagcaaaattctaaacatga cctagaatgtatgccaaagaaccagctaaagacagagctctgtaatcagagagatgccgcttag |
Protein
Protein ID | pfu_aug1.0_10514.1_24749.t1 |
---|---|
Definition | - |
>pfu_aug1.0_10514.1_24749.t1 MPEQTKAPLGGSKRFECRVVGFPRPTVQWFKDGRDITHDDRFEFDFSIDGVITMVIHNVTFKDQGVYSCRAENSEGWAAT AAILNVRGTRSNRISKYNYEEQNSKHDLECMPKNQLKTELCNQRDAA |