Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_104173.1_64248
Locus scaffold104173.1 : 1 ... 1408 : +
To GenomeBrowser scaffold104173.1:1..1408
Genes list of scaffold scaffold104173.1
Synonym pfu_aug2.0_1.1_03319

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_104173.1_64248.t1 1 1 DUF3504 129 264 2.2e-09 37.3 5.7e-13 4.2e-09 36.4

Transcript
Transcript IDpfu_aug1.0_104173.1_64248.t1
Definition-
>pfu_aug1.0_104173.1_64248.t1
aatggcacatagagaagtttggattcaaagcagatttccaaaatttgtcaaaatctgttattgctgaaaagctcaggtct
ttttactgtgaggcaacaccaaagaatgttgatggaagggcaaaaggcatgtctacagatcaggccgcagagtatcacaa
aaactcattggtaaacatgagggcagctataaaccgacatctacacgacttaggtttggacatggacattgttcgggata
aggaatttctccatgcaaactatgcattagatggcacactgaaaaatcaaacgaaaaaaagtatcgcccgttcaactgaa
cacaaaaaggtcatcaacacgaatgacttgagaaagatctctacatacctttgtactggataccgttcttcgcccattat
cttacgacaagctgtttggttccttatttcaatgcattttgtcaaccgtggcatggaatttcactatcagctgctgaggg
attctttcgaaataaaggctgatgaaaatggggatgagtacgcctcattgacacatgaaacactccagaaaaaattccag
ggaggtctgtgcagtgaggaagcaccccaagataggcgaatgtatgccgtaaatgaatccgagttatgtcccctgaaagt
tctccgattttaccttgatcacttacatcctgaatcaacgcacttatttaatcactgtgataaggaagctctcttgtttc
cagaaaagaaagatacctggtacattccaaagccactttccaaaaagggattttccagtttcatgcgttatgttgtaaag
gcagcagatttgtccgaaagttacaccccccaaattgtctgcgagcaacagcaattcagaaaatga

Protein
Protein IDpfu_aug1.0_104173.1_64248.t1
Definition-
>pfu_aug1.0_104173.1_64248.t1
WHIEKFGFKADFQNLSKSVIAEKLRSFYCEATPKNVDGRAKGMSTDQAAEYHKNSLVNMRAAINRHLHDLGLDMDIVRDK
EFLHANYALDGTLKNQTKKSIARSTEHKKVINTNDLRKISTYLCTGYRSSPIILRQAVWFLISMHFVNRGMEFHYQLLRD
SFEIKADENGDEYASLTHETLQKKFQGGLCSEEAPQDRRMYAVNESELCPLKVLRFYLDHLHPESTHLFNHCDKEALLFP
EKKDTWYIPKPLSKKGFSSFMRYVVKAADLSESYTPQIVCEQQQFRK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495