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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_10407.1_17622
Locus scaffold10407.1 : 1 ... 29070 : +
To GenomeBrowser scaffold10407.1:1..29070
Genes list of scaffold scaffold10407.1
Synonym pfu_aug2.0_99.1_30195

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug1.0_10407.1_17622.t1 1 1 PARP 141 324 0.0 210.9 0.0 0.0 210.4

Transcript
Transcript IDpfu_aug1.0_10407.1_17622.t1
Definition-
>pfu_aug1.0_10407.1_17622.t1
atcgtcaaacaaaccattagaaaatatgaaatttgtgatactaggaaagacagtcaaatctaaaggtgacctaactaagg
aaatcatgtccctaggtggtcatgtagttagcaaagtggcgtctgacgtggcggcttgtatcggcactaaagagaatatg
tatacgaagagcgttccttcaaccatgaaaatgaaagtgaagggcggggctgctgttgacccagattcagaaaagacagg
gaatgaatggtcaaacagacatgacttcaagaaatatcctaacaaattctatcctctggatattgattatggccagtcca
aggttgagatgttggataacttgttagagatagaggtcgcttacaacatgttaaagggaggcgactctggcgaagatccc
attgacgcccattataaaaaactacataccaagctggtgccagtggagaagaaatctgatgaatatgaacgtttgtgtaa
ttatgtgaagaacacccatgctgcgacacataaccagtatgacttggttgtagaagagattttcacagtagacagagagc
acgaggcggacaggtatgctccattccgagatctacataacaagatgttattgtggcacgggtcacgtacaactaatttt
gccggtattctgtcccagggtctcaggatagccccgcccgaagccccagtaacaggctacatgtttggtaaaggaatcta
tttggccgacatggtatccaagagtgctaactactgtaggacgtcaaaggctgaccctactggtctactgctgttatgtg
aagcagctctaggaaacatgtatgagagaactggagctgaattcgttacatccctacccaagggcaaacacagctgtaaa
ggtataggaatgacttgtcctgaccctaagcagtcctacaccaccccagacgatgttgtgatacctttggatgatgatga
tgatgatgatgatgatgatgatgatgaactttacattatgtgcatctga

Protein
Protein IDpfu_aug1.0_10407.1_17622.t1
Definition-
>pfu_aug1.0_10407.1_17622.t1
SSNKPLENMKFVILGKTVKSKGDLTKEIMSLGGHVVSKVASDVAACIGTKENMYTKSVPSTMKMKVKGGAAVDPDSEKTG
NEWSNRHDFKKYPNKFYPLDIDYGQSKVEMLDNLLEIEVAYNMLKGGDSGEDPIDAHYKKLHTKLVPVEKKSDEYERLCN
YVKNTHAATHNQYDLVVEEIFTVDREHEADRYAPFRDLHNKMLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIY
LADMVSKSANYCRTSKADPTGLLLLCEAALGNMYERTGAEFVTSLPKGKHSCKGIGMTCPDPKQSYTTPDDVVIPLDDDD
DDDDDDDDELYIMCI

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