Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug1.0_1039.1_43890
Locus scaffold1039.1 : 16442 ... 27545 : -
To GenomeBrowser scaffold1039.1:16442..27545
Genes list of scaffold scaffold1039.1
Synonym pfu_aug2.0_7468.1_29578

Manual annotation
Study fieldBiomineralization
Gene nameN19-D
DescriptionNCBI BLASTP best hit to BAK57295
mRNA evidence

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug1.0_1039.1_43890.t1 gi|342330706|dbj|BAK57295.1| nacre protein [Pinctada fucata] 1.0e-19

Transcript
Transcript IDpfu_aug1.0_1039.1_43890.t1
Definition-
>pfu_aug1.0_1039.1_43890.t1
atgctgtttgtcatctggatcctacttgctactttggcgacaagatgggcttcgtgtagttgccgctcgacgagatacaa
tagcgacgggaaatttaacatggtgtacattgatagacatcggctcagatgtggaagtagaggcatgacacgatttaatc
tggatagaggtgctgggggaaccatccgctttgaatacggctgctgtaacatacgaaagaggcaaaatgtccgtacattc
catacagtctatacgtatgatggaaagggaaatttggtttaccttgaccgtcgaaaggtgtcctatggacggaagggaat
tctctctggattcaatcttggatatggtcattatcaatatttgtcatatactttccataatgctctttcacactctgtct
tcttttttcttctttctccatccaaactgagtatcagatattttcgcctcttttctgttgagagtgtacgctactgccat
gtttgttttgatttgtacaacacgacgagccgtatcgcacacgcagaccagagattgaatgaattctgcttcgtacgagt
aaagaaaaatgtcggcaaggagtggggcacaattggtccccattggaattccgacaatttgctgaatccaaacccccaag
ttgtatcttatatcgcgattgagggaacagtcatcatctatatgttcttatatatcttctggatgttccggcacatgaga
catctgttcaatactgtgattcatttgttccggatcttgttccagttgttccgcgtttcgattccgagcgtcaggaactt
agtcttctga

Protein
Protein IDpfu_aug1.0_1039.1_43890.t1
Definition-
>pfu_aug1.0_1039.1_43890.t1
MLFVIWILLATLATRWASCSCRSTRYNSDGKFNMVYIDRHRLRCGSRGMTRFNLDRGAGGTIRFEYGCCNIRKRQNVRTF
HTVYTYDGKGNLVYLDRRKVSYGRKGILSGFNLGYGHYQYLSYTFHNALSHSVFFFLLSPSKLSIRYFRLFSVESVRYCH
VCFDLYNTTSRIAHADQRLNEFCFVRVKKNVGKEWGTIGPHWNSDNLLNPNPQVVSYIAIEGTVIIYMFLYIFWMFRHMR
HLFNTVIHLFRILFQLFRVSIPSVRNLVF

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495