Gene
| Gene Model ID | pfu_aug1.0_10295.1_24714 |
|---|---|
| Locus | scaffold10295.1 : 27678 ... 48035 : - |
| To GenomeBrowser | scaffold10295.1:27678..48035 |
| Genes list of scaffold | scaffold10295.1 |
| Synonym | pfu_aug2.0_7843.1_12954 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10295.1_24714.t1 | 9 | 1 | LRR_8 | 43 | 83 | 2.89999e-41 | 139.0 | 1.0e-06 | 0.0022 | 17.7 |
| pfu_aug1.0_10295.1_24714.t1 | 8 | 1 | LRR_4 | 48 | 87 | 1.10002e-41 | 139.7 | 2.8e-10 | 6.0e-07 | 28.9 |
| pfu_aug1.0_10295.1_24714.t1 | 9 | 2 | LRR_8 | 49 | 106 | 2.89999e-41 | 139.0 | 1.4e-10 | 2.9e-07 | 30.1 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 1 | LRR_1 | 50 | 69 | 8.8e-22 | 73.7 | 0.019 | 41.0 | 4.7 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 1 | LRR_7 | 50 | 63 | 2.7e-13 | 47.7 | 0.064 | 140.0 | 3.4 |
| pfu_aug1.0_10295.1_24714.t1 | 9 | 3 | LRR_8 | 71 | 129 | 2.89999e-41 | 139.0 | 4.4e-13 | 9.4e-10 | 38.1 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 2 | LRR_7 | 71 | 87 | 2.7e-13 | 47.7 | 3.8e-05 | 0.08 | 13.1 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 1 | LRR_6 | 71 | 84 | 3.0e-08 | 32.9 | 0.11 | 230.0 | 2.3 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 2 | LRR_1 | 73 | 93 | 8.8e-22 | 73.7 | 5.5e-05 | 0.12 | 12.5 |
| pfu_aug1.0_10295.1_24714.t1 | 8 | 2 | LRR_4 | 94 | 133 | 1.10002e-41 | 139.7 | 4.8e-11 | 1.0e-07 | 31.4 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 2 | LRR_6 | 94 | 107 | 3.0e-08 | 32.9 | 0.0048 | 10.0 | 6.5 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 3 | LRR_1 | 95 | 114 | 8.8e-22 | 73.7 | 0.00012 | 0.25 | 11.4 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 3 | LRR_7 | 95 | 110 | 2.7e-13 | 47.7 | 0.0002 | 0.42 | 11.0 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 3 | LRR_6 | 116 | 131 | 3.0e-08 | 32.9 | 0.061 | 130.0 | 3.1 |
| pfu_aug1.0_10295.1_24714.t1 | 9 | 4 | LRR_8 | 118 | 178 | 2.89999e-41 | 139.0 | 4.8e-12 | 1.0e-08 | 34.8 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 4 | LRR_1 | 118 | 139 | 8.8e-22 | 73.7 | 0.0068 | 14.0 | 6.1 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 4 | LRR_7 | 118 | 132 | 2.7e-13 | 47.7 | 0.16 | 340.0 | 2.2 |
| pfu_aug1.0_10295.1_24714.t1 | 8 | 3 | LRR_4 | 126 | 144 | 1.10002e-41 | 139.7 | 0.00034 | 0.72 | 9.5 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 4 | LRR_6 | 139 | 160 | 3.0e-08 | 32.9 | 0.0016 | 3.4 | 8.0 |
| pfu_aug1.0_10295.1_24714.t1 | 8 | 4 | LRR_4 | 146 | 179 | 1.10002e-41 | 139.7 | 1.9e-08 | 4.0e-05 | 23.1 |
| pfu_aug1.0_10295.1_24714.t1 | 9 | 5 | LRR_8 | 146 | 201 | 2.89999e-41 | 139.0 | 1.4e-11 | 2.9e-08 | 33.3 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 5 | LRR_1 | 146 | 165 | 8.8e-22 | 73.7 | 0.0017 | 3.6 | 7.9 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 5 | LRR_7 | 146 | 157 | 2.7e-13 | 47.7 | 0.09 | 190.0 | 3.0 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 5 | LRR_6 | 165 | 179 | 3.0e-08 | 32.9 | 0.056 | 120.0 | 3.2 |
| pfu_aug1.0_10295.1_24714.t1 | 9 | 6 | LRR_8 | 167 | 223 | 2.89999e-41 | 139.0 | 2.0e-09 | 4.2e-06 | 26.4 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 6 | LRR_7 | 167 | 182 | 2.7e-13 | 47.7 | 0.0092 | 20.0 | 5.9 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 6 | LRR_1 | 168 | 184 | 8.8e-22 | 73.7 | 0.00048 | 1.0 | 9.6 |
| pfu_aug1.0_10295.1_24714.t1 | 8 | 5 | LRR_4 | 189 | 227 | 1.10002e-41 | 139.7 | 2.7e-08 | 5.6e-05 | 22.6 |
| pfu_aug1.0_10295.1_24714.t1 | 9 | 7 | LRR_8 | 190 | 238 | 2.89999e-41 | 139.0 | 6.6e-06 | 0.014 | 15.1 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 7 | LRR_7 | 190 | 205 | 2.7e-13 | 47.7 | 0.017 | 35.0 | 5.2 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 6 | LRR_6 | 190 | 203 | 3.0e-08 | 32.9 | 0.19 | 400.0 | 1.6 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 7 | LRR_1 | 191 | 206 | 8.8e-22 | 73.7 | 0.003 | 6.3 | 7.2 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 8 | LRR_1 | 213 | 230 | 8.8e-22 | 73.7 | 0.18 | 390.0 | 1.7 |
| pfu_aug1.0_10295.1_24714.t1 | 9 | 8 | LRR_8 | 312 | 366 | 2.89999e-41 | 139.0 | 6.9e-06 | 0.015 | 15.0 |
| pfu_aug1.0_10295.1_24714.t1 | 8 | 6 | LRR_4 | 313 | 327 | 1.10002e-41 | 139.7 | 0.029 | 62.0 | 3.3 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 8 | LRR_7 | 313 | 326 | 2.7e-13 | 47.7 | 0.033 | 70.0 | 4.3 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 7 | LRR_6 | 313 | 324 | 3.0e-08 | 32.9 | 0.63 | 1300.0 | 0.0 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 9 | LRR_1 | 314 | 328 | 8.8e-22 | 73.7 | 0.01 | 22.0 | 5.6 |
| pfu_aug1.0_10295.1_24714.t1 | 8 | 7 | LRR_4 | 335 | 365 | 1.10002e-41 | 139.7 | 5.6e-06 | 0.012 | 15.2 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 8 | LRR_6 | 335 | 346 | 3.0e-08 | 32.9 | 0.041 | 87.0 | 3.6 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 10 | LRR_1 | 336 | 353 | 8.8e-22 | 73.7 | 0.015 | 31.0 | 5.1 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 9 | LRR_7 | 336 | 349 | 2.7e-13 | 47.7 | 0.094 | 200.0 | 2.9 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 11 | LRR_1 | 358 | 370 | 8.8e-22 | 73.7 | 0.2 | 430.0 | 1.6 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 10 | LRR_7 | 358 | 366 | 2.7e-13 | 47.7 | 0.36 | 760.0 | 1.2 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 9 | LRR_6 | 358 | 366 | 3.0e-08 | 32.9 | 0.18 | 380.0 | 1.7 |
| pfu_aug1.0_10295.1_24714.t1 | 9 | 9 | LRR_8 | 383 | 435 | 2.89999e-41 | 139.0 | 2.7e-08 | 5.8e-05 | 22.7 |
| pfu_aug1.0_10295.1_24714.t1 | 8 | 8 | LRR_4 | 403 | 438 | 1.10002e-41 | 139.7 | 1.4e-10 | 3.0e-07 | 29.8 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 11 | LRR_7 | 403 | 417 | 2.7e-13 | 47.7 | 0.032 | 68.0 | 4.3 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 10 | LRR_6 | 403 | 415 | 3.0e-08 | 32.9 | 0.0027 | 5.6 | 7.3 |
| pfu_aug1.0_10295.1_24714.t1 | 12 | 12 | LRR_1 | 405 | 423 | 8.8e-22 | 73.7 | 0.0002 | 0.43 | 10.7 |
| pfu_aug1.0_10295.1_24714.t1 | 11 | 11 | LRR_6 | 423 | 436 | 3.0e-08 | 32.9 | 0.047 | 100.0 | 3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10295.1_24714.t1 | gi|156404169|ref|XP_001640280.1| | predicted protein [Nematostella vectensis] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10295.1_24714.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10295.1_24714.t1 atggtacacaaaaaaagtatttcagcgcgcagtgacaagtcattttacgtacctgacacagtttggcgtttgaacattga tgttcccgaggaggctagaacagtgtcactggataatacggaggacagatggtgggaacagactgaactgaccaagctga tccttgcctctaatctactgacagaactctctgaggacataagtaacttccctgctctcacagtgttagatgtacatgac aatagattagaatcactgccagacaatctgaaaaccctagagaacctagtcaagttagacatcagtcggaataaactaaa acaattaccagtcagtataacgtgccttagaagtttgaagagtttacatgcagagtataatgaaataacagaaatcagtg atgaaattggaaaccttagcagtctggaagactttgagcttcatttaggtaacaatcagatcaaagagattacaccagaa catctcaaacatctctcatctgtcacagtcctggacatgcgagataataagctgacggtgctgccagacgagatagtatt tcttacaggcttacagagaatagatctcaccaataatgatctgacagggctgccatacattttgggtacaatcacgtcac tgaagtcagtggttctagatggcaatccaatgaaatcaattaggagggatatcataatgagagggactgttgaattgaag aaatacctagtcagtagaatggaggcgcctgaacctgtagtccaatcaaataagggcttacaaaacggatcaggaggaga ttctggtatcattggtggatctggagacggactcaaggctcatgatatacatcagaataaagctttagattttagcaaga aaggtataagtgagataccagacgatgtttgggatgtagccgtcaagagtggtgtgaccaatgttaacctgaataggaac aattttacacaacttccttcaacggtcttactagtgagtgatactttgaaagagttataccttgggtttaacaaggtagc ttcactgagttcagatataggacttctgtttcacctgactactttggacttaagatttagcacattgccagctgtcttgt accaatgtaagaagatggagattatatttgccgatagcaacaagatcgataccatggatgccgctggcatacaaagtctt cctgtactcggcacacttgatttacaaaacaacaacattggccaggtccctccagagcttggcaactgtactcagataaa gtcccttatgctgaatggaaatgccttccgtaatcctcgaccagccatactggcaaaaggtacacctgccctactagagt acctacgaagtaggatagtcacatga |
|
Protein
| Protein ID | pfu_aug1.0_10295.1_24714.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10295.1_24714.t1 MVHKKSISARSDKSFYVPDTVWRLNIDVPEEARTVSLDNTEDRWWEQTELTKLILASNLLTELSEDISNFPALTVLDVHD NRLESLPDNLKTLENLVKLDISRNKLKQLPVSITCLRSLKSLHAEYNEITEISDEIGNLSSLEDFELHLGNNQIKEITPE HLKHLSSVTVLDMRDNKLTVLPDEIVFLTGLQRIDLTNNDLTGLPYILGTITSLKSVVLDGNPMKSIRRDIIMRGTVELK KYLVSRMEAPEPVVQSNKGLQNGSGGDSGIIGGSGDGLKAHDIHQNKALDFSKKGISEIPDDVWDVAVKSGVTNVNLNRN NFTQLPSTVLLVSDTLKELYLGFNKVASLSSDIGLLFHLTTLDLRFSTLPAVLYQCKKMEIIFADSNKIDTMDAAGIQSL PVLGTLDLQNNNIGQVPPELGNCTQIKSLMLNGNAFRNPRPAILAKGTPALLEYLRSRIVT |
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