Gene
| Gene Model ID | pfu_aug1.0_10289.1_68171 |
|---|---|
| Locus | scaffold10289.1 : 19826 ... 38874 : + |
| To GenomeBrowser | scaffold10289.1:19826..38874 |
| Genes list of scaffold | scaffold10289.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10289.1_68171.t1 | 3 | 1 | WD40 | 1 | 15 | 4.1e-08 | 32.7 | 0.0017 | 13.0 | 5.8 |
| pfu_aug1.0_10289.1_68171.t1 | 3 | 2 | WD40 | 50 | 74 | 4.1e-08 | 32.7 | 0.0095 | 70.0 | 3.5 |
| pfu_aug1.0_10289.1_68171.t1 | 3 | 3 | WD40 | 83 | 131 | 4.1e-08 | 32.7 | 8.0e-08 | 0.0006 | 19.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10289.1_68171.t1 | gi|326916991|ref|XP_003204788.1| | 5.0e-12 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| egg-4cell | 1 |
| 8-16cell | 1 |
| egg-Dshape | 1 |
| trochophore | 1 |
| >Adult tissues | |
| adductorMuscle | 1 |
| maleGonad | 1 |
| mantle | 1 |
Transcript
| Transcript ID | pfu_aug1.0_10289.1_68171.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10289.1_68171.t1 atgctggcatcaggagggtcagatgaaacaatacagctttataatctgaggaatcgtagacagttgggatgtttagatca gcactcgggaattacatttgttttaaatcacatccagacagctgcagttcatgtgtcctggacaactgagaagaggataa atgacttggtattccttaataatacagtagttgcgtatggtggtgatgatggtgtagttttctttcacgatatcaaagag agcaaggttctaggtttactggaaaccaatacaagcagaattcgaggtttgagtatgacacctaatatactggacgagat aaatcaagagattaaagaggacagctgtgtcctttgtacagcatccagtgatggttatatcaaagtgtacaatgtagaaa tcataaagggggaggtaaagcacagattacttgcttccgccaatacagaattccgtttaacgtctatagctgtggcatta cacaaaaacaagaaagaaaagactgaagactcggaagatgtgaaaccagacgttgtgttaacaagtacagagagtgatga ggatgagaagaaaataacaacatctgacagtgaaagtgaagaaatcataattgttaagggaaggacagacaagtcgggga gtgtggcggaaatagacagattaggagacagccaacagaagaaagttaaaaaatctaaaaaaggaaaacataaaagaagt tttagtgatacagactctaaaatgcttgaggaaacaccgaaaaaactcaagaaagataaaagcaaagttgttagttttga agatcagaagtctcatgcagggaaaggaagcagcaagaaagagcagatcaagaagaaaaagaaaatgaaaacatga |
|
Protein
| Protein ID | pfu_aug1.0_10289.1_68171.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10289.1_68171.t1 MLASGGSDETIQLYNLRNRRQLGCLDQHSGITFVLNHIQTAAVHVSWTTEKRINDLVFLNNTVVAYGGDDGVVFFHDIKE SKVLGLLETNTSRIRGLSMTPNILDEINQEIKEDSCVLCTASSDGYIKVYNVEIIKGEVKHRLLASANTEFRLTSIAVAL HKNKKEKTEDSEDVKPDVVLTSTESDEDEKKITTSDSESEEIIIVKGRTDKSGSVAEIDRLGDSQQKKVKKSKKGKHKRS FSDTDSKMLEETPKKLKKDKSKVVSFEDQKSHAGKGSSKKEQIKKKKKMKT |
|