Gene
| Gene Model ID | pfu_aug1.0_10151.1_17587 |
|---|---|
| Locus | scaffold10151.1 : 10096 ... 25232 : + |
| To GenomeBrowser | scaffold10151.1:10096..25232 |
| Genes list of scaffold | scaffold10151.1 |
| Synonym | pfu_aug2.0_1.1_03372 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10151.1_17587.t1 | 1 | 1 | Helitron_like_N | 390 | 543 | 4.5e-25 | 88.4 | 7.7e-28 | 1.3e-24 | 86.9 |
| pfu_aug1.0_10151.1_17587.t1 | 1 | 1 | PIF1 | 1050 | 1382 | 6.3e-29 | 101.0 | 2.6e-31 | 4.3e-28 | 98.3 |
| pfu_aug1.0_10151.1_17587.t1 | 1 | 1 | AAA_30 | 1050 | 1264 | 7.5e-14 | 51.7 | 1.3e-16 | 2.2e-13 | 50.2 |
| pfu_aug1.0_10151.1_17587.t1 | 1 | 1 | AAA_19 | 1075 | 1136 | 5.5e-06 | 26.0 | 7.8e-09 | 1.3e-05 | 24.8 |
Transcript
| Transcript ID | pfu_aug1.0_10151.1_17587.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10151.1_17587.t1 atgcctaggaagaagttttggagaagaggtgcaactcaaaagaagggggatagccacccctccaacaagggcttgacatt tgacattgaccaggttaatcctcctgtaaaaaaggtcatggacgaccaggttaatcctcctgtaaaaaaggtcattggtg accaggttaatcctcctgctaaaaaaaaggtcatatttcagaatattgctagaaaatctaccagaaaccttgctagaata tctgctagaaaccttgctagaaaatctaccacaaaatctgctgtatcaaatagttctacattgctttgtcaatatcaaat aagaaatgaggaatccatgatcgatgcacacatgcctgatagccatgatgatacacaaactgttaggcaaaggaatttga ataatgatgaagctggtatcgtacattcatcagtaagcactatatttgcctcacacaatcaaagtgatgacagacaaatg gatgatactggtaccatcccaattaaattgaaaaagaaaatgtcatacaaaaaatgtgacttcaaagaaaacatacggcc aaatattgtattgtcagccttacattggttgatggctgaaagtgacttgtacaaaaactctggtgttcaagttgatgaat cttgggagcaaagtattacaaatgatagtcgagagatagtaagggagtttgtatccaatgaatcaagtggaacaataaca aatgtcattaataataatgaacaaagtgcagattctgggaaagatacaattgacgaaattggatatgaatctgataatta cagtgagattgacagtagtgaaaatgtaacaggaaatgcagatacattgttggaagatgaaagtttgaatactgacaaat cctatacatttgccccaggagaaggacaacatccattaagcctttacactgatcatgatgcagagtatttgtcttttcca tcaatattttgtggacaaagaagaccaactaataaagaaagattagtcccagttcattacacagatattgcaaaatggga attaagaagtcaagatcggagagctgcacagtcagtgccaaacatattcttcaaacttaagaaaatacaattgaaacaga taagtgacaaagtacatttagcagtgagaagaataaaaacgaaagggaaaaaaataactgcagcacaagctcgagatcag tctacacttgatagaattgtacgtttagatgaaggctattacatatttagacagttacgcaattctcctgcctatttagc tacaaaaaagaaagatatttttgcaatgattagacaactaggtttgcccacatggtttatgtccttatcctcagcagaca caagatggccatttttattgaaatctctagcgaaacttgatgggaaaatattatcggatgatgatgttagtaatttgtca tggcaagagagaagtacattagttcaaaaggatcccatcgcttgttctcgcatatttaatgatagagttcaacagttcat aaaaatctttctgaaaagcccacatcaaccggttggtcacgtaacagactacttttaccgtgttgaattccagcaaagag gctctccgcatatccatatgcttgtgtgggtagatgatgcacctaaatatcccaaagactcggatgaagcagttgttgaa tttgttgacaattatgttacatgttcaaatgaaaaggataagttgtctactttaattgagctgcaaacacataaacattc caaaacatgcagaaaaaagggcaaagctgtatgtagatttggttttccacttccaccattgagaacaactatgcttttgg aaccgcttgagacagatattgagaagtacaagaagaggtatgatgaaatccagaacaagatgaacaagtacaaagatgga atgaatttttcgtacgaccagttcttaaaggaagtagtagacatgccacaggatgagtatattaagtgtattagaagttc catcaatggccccaaagtttttttgaaaaggacaccttcagaggttagagtcaacatgtacaatgaaaatttgctgcaag cttggaatgcaaatattgacttgcagttcgtccttgatccttacgcttgtgcaatgtatattgtttcctacatcagcaaa tcacaaagaggaatgagtgctttgatggatagagcatgcaaagaagcaaggcagggtaatatggacattaaaaaacaagt tcgtcacattggaaatcactttctgaatagtgttgaagtcagtgcacaagaagcatcatatctagtgttacaaatgccat taacaaaagggtcaagggatgtcatattcataaatacatcgcctcctcatgaaagagtcgtcttattgaaacaacagtct gatcttatggaactaagtccagagtctactgacattcattaccaaaatatcatagcacgttactcaaaaagaccaacaca gcttgaaaattggtgcttggcagattatgcctctcaactggaagtgaaatatcctgatgacacaaagaaaaaggacattc agcaagagataaatgatgatgataatatagacgcagtcgcgaatggagatgaggattcagaattttcagaggatgatatt cttgtcaccctaaaaaatggtattatcatcagaagacgcatacatgatctgattttgcgatatgtacactacaatcttaa gactgatccagaaaaccattacagagagaagttacttttattcatgccatggcgagatgaagatgttgatttattgaatg gacataacagttaccaggagcactacaagcaagttcactttttagttggtcataaggcaaattattatgagaaaaatatt gacgagattgagcgagctatgcaacaggcagaagaagaatttgcacagcatgatgaaatagccccaaatgcccaacaaag aaatgctgatgatgaagctgaaggtcagcaagaagccagggactttgtacactttaatcctgatagacctcttgaacaca gacgatacgacataggtgctgatattgctgcttcaacttcagtcccaagcattgaatgtcatagtgacagaatatctgat gacgattatttaaaattagtcaggagtctgaatatcaaacaaagagaattttttacacatgttctccactggattaaaac aaaagatcagccgatttatgcatttttatcgggaggtgctggcgttggaaaatctgttttgattaaagccatctaccagg ctttacatagacagttacactcaatagagggagaagatccagatgacatcagaatcttactttgtgcttttactgggaaa gcagcatataacatcaatggtgtgacaattgcatctgcattccacaagaaatataatcagaataatcagtcgatgagctc cgatgaattgaacactttccgaatgaaatatagaaatctttctgtggtgataattgatgaaatatcaatggttggaggca aaatgttaagtttcattgactgcagattgaaacagttgactgcaacaaataaaccattcggtggtataagtatcattgct gtaggagacctgtttcagttacagccagtaggtgactcttggatatttaacgacttgtctgatggacctcaagctctagc aacaaatctatggaaagaacatttcaggatatttgaactgactcagattatgcgacaaaaagatgacatgtattttgcaa atcttctcaacagattgcgaaccaatgatttaacagaggacgacaaaattgaaattgacaagcacaaagtaaatccaact caggacaactatccaaagaatgctcctcatttgtttattgaaaataaatttgtagacaacttcaataaagagttcattgg aaagttatctacaatgaaggttgaagtattgagtcatgatgcagtaatagctgatttaccacaatcgagcaaagatagac tcctgaaaagcttgccaatggattcgagcaaaacagcaaacttagctcattcattgattcttgcagtcggtatgatatat gacatcactattaatctagatgttaatgatggaatagcaaatggttctatctgtattatcaaaaatattgaaaatcgaat tcttcaaacttcaagaccaagcattgtatgggttttattcactgacttgaccattggatcaattacaagacagaagtata agcatttgtaccatgcatacattgaccctttatggacaccaatttttgatgtgaatcgaaattttctctacaattacaaa tcttatcaaagaacacaatttccacttaagccagcagctgctaaaactgttcacaaggcacaaggatgtacagtagatga gattgttattgacctatcacagacaagaacgagaaaatctgcacatattcattatgtagcgatgagcagagtaagaagat ttgaaaatctacatattttgaattttaattacgctgcactaggaacagatgatagagtcaaagacgaaatgaagagaatt cgagaggaagcaaacttagaattatgttacaaaactttatatgatgtagactcgtgtcatttcaaattagctttcaacaa tgcacggtcgtttcacaagcatttcactgatatttctgtagatccaaatatgttagccgcagatgtaattggtatcatgg agtcgaggctatatagttcagatctagatgaaacttacgcactcaatggttttgagatgcatagatgtgatcaaatcggt caaggaagtagcaaaagacctagtcatggactcgttttgtatctaaaggatgacatggaatgtaagcaagtactcaaaca cagtacagataaggtggaatggttgctctgtgaaacatctcatcctacaactggatcgataaacctattgcttgtatata aatctccatcctgctcactttctgagttcaaacactcaactttgcgctaccttttaccacaagtagatttaagtcaaccc ttacttgcatttggtgacttcaactttgatgttggctctggaaattcagaatttttgcattttatgaatgagacgcttca ttccacccagtgctccgacaacggagggattttcgctataactacaacaatggcggcaaaaaggaaagtgctcgtggaag atgaagaggagaaatctcaaattcttggatatttacataatgtctcacagttgcaaacgtcggctaaaggaagaaaatac tttcatgcagtaatacaaaccacaaaagatgagaaatatagacttgttgcgttttccccagagaaacacaatacgtacac aatggctgcaaatctaaactctcctgttcagctgaaaaacgcaaaattttcgccgtcaaggaatggagaattagaagtta ttgttgacagatcaacaagtcttgaaatggtaaaacaaaagcttgacttcaaaaagaaaaaactggatccacctcaacag tcaatcttaaaatccctgtcagacctaacggaggagaacatgttggtaacactaaatgtaaagctgttgaattttacgaa tgaagaaacagaagtttacacaaagtatggggctaagtcagtccgcaatgccataattgcagataaatcaggaaccaaaa ccatttctttttgggggaacgtaattgcttcagtgaaacagggaagcttttataacctaaccaatgtcgttacaaaaaaa tttgatgaaaacataactctatcaacaactacgaatacaaaagcgctgcaaataccaattttcgatgaggtaaaagaaga agatgttccgatacaacatactgagaacattgttattaccagtataaatgtaataacttcttatagatgttccaacaaat cgtgcagtgcaacatttcctattcaagaactgaaaggaacatttatgaaatgttccacatgtaaaatgaaacagaaagtt gaaaacatcattaagtccacatcagctaaagcagtctgcaaaacagaaacagactgtaacaaacaaatcttgattagcca gcaagctctagaaaattatttaggaaaggaaaataatgaactaatgaaggatgaagatgcgcttgaggatcacatcctta cagttgaaaatttcagaatcacaacaggaaataaccgagagatatgcatcaaattggaatctgcgtga |
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Protein
| Protein ID | pfu_aug1.0_10151.1_17587.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10151.1_17587.t1 MPRKKFWRRGATQKKGDSHPSNKGLTFDIDQVNPPVKKVMDDQVNPPVKKVIGDQVNPPAKKKVIFQNIARKSTRNLARI SARNLARKSTTKSAVSNSSTLLCQYQIRNEESMIDAHMPDSHDDTQTVRQRNLNNDEAGIVHSSVSTIFASHNQSDDRQM DDTGTIPIKLKKKMSYKKCDFKENIRPNIVLSALHWLMAESDLYKNSGVQVDESWEQSITNDSREIVREFVSNESSGTIT NVINNNEQSADSGKDTIDEIGYESDNYSEIDSSENVTGNADTLLEDESLNTDKSYTFAPGEGQHPLSLYTDHDAEYLSFP SIFCGQRRPTNKERLVPVHYTDIAKWELRSQDRRAAQSVPNIFFKLKKIQLKQISDKVHLAVRRIKTKGKKITAAQARDQ STLDRIVRLDEGYYIFRQLRNSPAYLATKKKDIFAMIRQLGLPTWFMSLSSADTRWPFLLKSLAKLDGKILSDDDVSNLS WQERSTLVQKDPIACSRIFNDRVQQFIKIFLKSPHQPVGHVTDYFYRVEFQQRGSPHIHMLVWVDDAPKYPKDSDEAVVE FVDNYVTCSNEKDKLSTLIELQTHKHSKTCRKKGKAVCRFGFPLPPLRTTMLLEPLETDIEKYKKRYDEIQNKMNKYKDG MNFSYDQFLKEVVDMPQDEYIKCIRSSINGPKVFLKRTPSEVRVNMYNENLLQAWNANIDLQFVLDPYACAMYIVSYISK SQRGMSALMDRACKEARQGNMDIKKQVRHIGNHFLNSVEVSAQEASYLVLQMPLTKGSRDVIFINTSPPHERVVLLKQQS DLMELSPESTDIHYQNIIARYSKRPTQLENWCLADYASQLEVKYPDDTKKKDIQQEINDDDNIDAVANGDEDSEFSEDDI LVTLKNGIIIRRRIHDLILRYVHYNLKTDPENHYREKLLLFMPWRDEDVDLLNGHNSYQEHYKQVHFLVGHKANYYEKNI DEIERAMQQAEEEFAQHDEIAPNAQQRNADDEAEGQQEARDFVHFNPDRPLEHRRYDIGADIAASTSVPSIECHSDRISD DDYLKLVRSLNIKQREFFTHVLHWIKTKDQPIYAFLSGGAGVGKSVLIKAIYQALHRQLHSIEGEDPDDIRILLCAFTGK AAYNINGVTIASAFHKKYNQNNQSMSSDELNTFRMKYRNLSVVIIDEISMVGGKMLSFIDCRLKQLTATNKPFGGISIIA VGDLFQLQPVGDSWIFNDLSDGPQALATNLWKEHFRIFELTQIMRQKDDMYFANLLNRLRTNDLTEDDKIEIDKHKVNPT QDNYPKNAPHLFIENKFVDNFNKEFIGKLSTMKVEVLSHDAVIADLPQSSKDRLLKSLPMDSSKTANLAHSLILAVGMIY DITINLDVNDGIANGSICIIKNIENRILQTSRPSIVWVLFTDLTIGSITRQKYKHLYHAYIDPLWTPIFDVNRNFLYNYK SYQRTQFPLKPAAAKTVHKAQGCTVDEIVIDLSQTRTRKSAHIHYVAMSRVRRFENLHILNFNYAALGTDDRVKDEMKRI REEANLELCYKTLYDVDSCHFKLAFNNARSFHKHFTDISVDPNMLAADVIGIMESRLYSSDLDETYALNGFEMHRCDQIG QGSSKRPSHGLVLYLKDDMECKQVLKHSTDKVEWLLCETSHPTTGSINLLLVYKSPSCSLSEFKHSTLRYLLPQVDLSQP LLAFGDFNFDVGSGNSEFLHFMNETLHSTQCSDNGGIFAITTTMAAKRKVLVEDEEEKSQILGYLHNVSQLQTSAKGRKY FHAVIQTTKDEKYRLVAFSPEKHNTYTMAANLNSPVQLKNAKFSPSRNGELEVIVDRSTSLEMVKQKLDFKKKKLDPPQQ SILKSLSDLTEENMLVTLNVKLLNFTNEETEVYTKYGAKSVRNAIIADKSGTKTISFWGNVIASVKQGSFYNLTNVVTKK FDENITLSTTTNTKALQIPIFDEVKEEDVPIQHTENIVITSINVITSYRCSNKSCSATFPIQELKGTFMKCSTCKMKQKV ENIIKSTSAKAVCKTETDCNKQILISQQALENYLGKENNELMKDEDALEDHILTVENFRITTGNNREICIKLESA |
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