Gene
| Gene Model ID | pfu_aug1.0_1014.1_65741 |
|---|---|
| Locus | scaffold1014.1 : 50816 ... 56460 : + |
| To GenomeBrowser | scaffold1014.1:50816..56460 |
| Genes list of scaffold | scaffold1014.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_1014.1_65741.t1 | 1 | 1 | efThoc1 | 32 | 159 | 3.89561e-43 | 147.6 | 0.0 | 4.49817e-43 | 147.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_1014.1_65741.t1 | gi|41151980|ref|NP_958481.1| | THO complex subunit 1 [Danio rerio] | 0.0 |
Expression profile
(Color code: FPKM>10&<50, blue; FPKM>50, pink)| Libraries | EST count |
|---|---|
| >Embryonic/Larval stages | |
| mix | 1 |
| >Adult tissues | |
Transcript
| Transcript ID | pfu_aug1.0_1014.1_65741.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1014.1_65741.t1 atggaccaggccatgcgagatattttgaagaaacacattgcagatgaggcaggtgttgaagtttacagaaactacacatt actatctattcaactggcagcaaatgaatgttgttctacggccatgccctttgtactcctgtcagatacatttgacctca taactctggaagaatgtgaagaagtgttcaatctggtagaagaaaacctgtccgtttggaaatcggagactttttatgat gcaggcaaaaactacctcctcagaatgtgcaatgatttactacgcagactttccaagtcacagaatacagttttctgtgg gaggattcagctcttcctgtctcgactctttcctttgtctgaaaaatcagctttgaacttaatgggccagtttaatttgg ataacataacaacattttcatcaaagtcagaagagttcaaatttaaagcacaagagatacacatgaaggatgatgtaatg gaggtagaggaaggagagatggaagatttctcaaggtattctatctacatgtatacagtctatatttag |
|
Protein
| Protein ID | pfu_aug1.0_1014.1_65741.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_1014.1_65741.t1 MDQAMRDILKKHIADEAGVEVYRNYTLLSIQLAANECCSTAMPFVLLSDTFDLITLEECEEVFNLVEENLSVWKSETFYD AGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLSRLFPLSEKSALNLMGQFNLDNITTFSSKSEEFKFKAQEIHMKDDVM EVEEGEMEDFSRYSIYMYTVYI |
|