Gene
| Gene Model ID | pfu_aug1.0_10026.1_38986 |
|---|---|
| Locus | scaffold10026.1 : 22591 ... 51765 : - |
| To GenomeBrowser | scaffold10026.1:22591..51765 |
| Genes list of scaffold | scaffold10026.1 |
| Synonym | pfu_aug2.0_1036.1_21358 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug1.0_10026.1_38986.t1 | 3 | 1 | RabGAP-TBC | 116 | 142 | 4.4e-06 | 26.3 | 0.042 | 210.0 | 1.2 |
| pfu_aug1.0_10026.1_38986.t1 | 3 | 2 | RabGAP-TBC | 153 | 173 | 4.4e-06 | 26.3 | 0.052 | 250.0 | 0.9 |
| pfu_aug1.0_10026.1_38986.t1 | 3 | 3 | RabGAP-TBC | 245 | 325 | 4.4e-06 | 26.3 | 1.3e-09 | 6.6e-06 | 25.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug1.0_10026.1_38986.t1 | gi|291241439|ref|XP_002740623.1| | 1.0e-36 |
Transcript
| Transcript ID | pfu_aug1.0_10026.1_38986.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10026.1_38986.t1 tgtcgatttattcgacagtgtggaatcaagcgatgaattgttacagatattccaaagaaagtcttcgcaaagggtagtga agacaacaacaacacagagtgcgaaaacggtgttaatcatattccgtcagagacaaagcgacgtttaagcacggggagta cagggtcagatatgggacagaggaacagccagggtagtgtggcctcagaggaatgggagcacatggagcctggtagtgtc agccattctaactcgtacagcaaagaatgggagagattattcaccaagccaaactaccgtaaacttctacgggattacgc aataagtggtaacctgagaagtagtagattccgcagtgtgtgctggaagatattcctggatgttctacctgacgatattt cactgtggatcaaaaggatgagggagtggaggaaaaaatataacgacctcaaacgaaatggtatgcatgaagtgttagct ccattaatatttgtcctacattgtgatcatcaagcattcctccatgcttcagaagtggaaagtctacaggagatcatcaa ggaagttatggacccagcttatttagagcatgatgcttagccacttgccaaatttcataatggcttacaaaatgacgaaa catgtccgaggacgtatcggtacaaagactttccgatgcatatttcggaagaaaatacactgatgcgatatgactttcat ttgtcaggtcatctagactctttagccaacctggtgagcgaatcttatacacaggttctgcataacctagacgaaaattt gcattttatgcaattgtcaaccaatcatattgccaagagtcgatgggtgcggctattgtttggtcgagagtttccaatgc aggatctcctggcattatgggatgctatatttgctgatgggatcggcttcgagctggtggattacatatttgtggccatg ttgctgtatataagggatctctgtacgtaa |
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Protein
| Protein ID | pfu_aug1.0_10026.1_38986.t1 |
|---|---|
| Definition | - |
>pfu_aug1.0_10026.1_38986.t1 CRFIRQCGIKRXIVTDIPKKVFAKGSEDNNNTECENGVNHIPSETKRRLSTGSTGSDMGQRNSQGSVASEEWEHMEPGSV SHSNSYSKEWERLFTKPNYRKLLRDYAISGNLRSSRFRSVCWKIFLDVLPDDISLWIKRMREWRKKYNDLKRNGMHEVLA PLIFVLHCDHQAFLHASEVESLQEIIKEVMDPAYLEHDAXPLAKFHNGLQNDETCPRTYRYKDFPMHISEENTLMRYDFH LSGHLDSLANLVSESYTQVLHNLDENLHFMQLSTNHIAKSRWVRLLFGREFPMQDLLALWDAIFADGIGFELVDYIFVAM LLYIRDLCT |
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