Gene
| Gene Model ID | aug_v2a.24200 |
|---|---|
| Locus | scaf17900 : 23311 ... 27643 : - |
| To GenomeBrowser | scaf17900:23311..27643 |
| Genes list of scaffold | scaf17900 |
Manual annotation
| Study field | Autophagy |
|---|---|
| Gene name | vps15-10 |
| Study field | IP3 pathway |
|---|---|
| Gene name | Adi-PIK3R4-7 |
| Description | Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Homo sapiens phosphoinositide 3-kinase regulatory subunit 4 gene. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| phosphoinositide 3-kinase regulatory subunit 4 isoform x1 | GO:0004674 GO:0005524 GO:0006468 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.24200.t1 | gi|617512961|ref|XP_007543088.1| | PREDICTED: phosphoinositide 3-kinase regulatory subunit 4 isoform X1 [Poecilia formosa] | 7.0e-17 |
| aug_v2a.24200.t1 | gi|617512968|ref|XP_007543090.1| | PREDICTED: phosphoinositide 3-kinase regulatory subunit 4 isoform X2 [Poecilia formosa] | 7.0e-17 |
| aug_v2a.24200.t1 | gi|551524242|ref|XP_005813606.1| | PREDICTED: phosphoinositide 3-kinase regulatory subunit 4-like [Xiphophorus maculatus] | 1.0e-16 |
| aug_v2a.24200.t1 | gi|658891941|ref|XP_008428851.1| | PREDICTED: phosphoinositide 3-kinase regulatory subunit 4 [Poecilia reticulata] | 1.0e-16 |
Transcript
| Transcript ID | aug_v2a.24200.t1 |
|---|---|
| Definition | - |
>aug_v2a.24200.t1 gtttcatcccaaaggaatcttagtggctcatcttcatgagcacaaagctgccattaaccggtcagtttaaggatgagtat ctcatgtgcaaacattttgtcacatgaaaattctgtgattttcttctaactgtgtttagaattcactaaagtgttctttg tctttgttgtggcagctgctgtgaattagcaactgtttccataatgttagtagtctaatggtgaaagtgaactttattgt aagcagataagctttcaaagtatgcgtgtaattattaatgaacactatttagccatgagtgtaggatgagtggatttttc ttgcattaaattttgagtcacaaactgactgtagtaacgttgaaacaatttggaagaatatgtgatctcttgttcttgtc aatgatcatctgtccgtggagtcaatgggcctgtaaagcatgtagaagttactctgcattggattgggttctgtaggaag caaaagtgtgaaaagtggctgagtggctatttcaatggttttatcttcctttcgtacttaaatcaattactcttctttat aaccccttcaagtaattcatttcgccgttgacgtagcactacaatctttacaaatttcaattctctgtgttgactgttca ggattcaagtgagctctgattattcgctccttgcatctgcctcagatgatggttcagtgaagctgtgggatctgcagaag cttgatgggcgaagtttgataaacaaatcacggcaaacacatcaattgaccaggtagagtagttccacatcataactcaa acgttcaattttgattttttgggtgattccattagtgacctatgacagaattcatggaaaatcaaaacaaacagatctgg cttcagatttttgaacggcggataacactgcccagaggaaataaagtcaatataatgtgcaactgatcagnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnngtgattttgaggtggcaatacaacattatattgacagctagtaaaataatgtgttccctatt gggcggagtcccgaagttttgtatcacgatccatcatttataaggataaataacactgtaaactaatcaacccgcacctg atcgaaatttcaattcttcgtttgtttaacaataattaacactttgaattcttgccagattaacaatcattttccaactg gcaagtgactttgtcacattattttttattacaatgtttatagttaataataactggcaatttttcaagaaccagttctt attctgtaatcaaacttgaaatttgtttatgaactatgttaattttcattcaaaacgcagcatcaatagaaaacgtctaa cttctattttcgattccaaaaaaaaattaagctttttgaagttaagtaccatttgtactggggtttctcaatgatgcaag agcttgatgattactgtaaaagtcgaattttcaataaatagtgttgaacttgaagtgaaatatttgtacaatcatttgaa tgcggaggcaatttgtttgtgttcgtcagcaacccaatttagtgcaacgacgtcaatttcaacattagaaccaatcacag gcggcaaaagtgagacggcaataccacgaaatattgatggctcgcacataggcaaaactataagatgtgcgcaatacttc tttgtatatgaagaataaaataattaagatctctaactaactgagttggcgggccatactgcattttttccatttcaatt tatggcctgagtgccgtgaattgaaggcgaaaaaaacaagctgctgtaacttactgtacagaccaagaaaacgaggtttg taagatgtttctctggaaaatgaatcacgctggaaagcacacaacaaagtcatactttatgttacatatttattccatac tttagattacagaccactaaatcaatcaatcatagtgcatatagtacctgaaatatattataataattcaacttattact gttcagttgagcattgaaaaaccaattaccggtgtgattacactagccagtggtagcaacagttgctgactatgaaacaa gccagtgccagaacacattttcatccttttcttagtcctgtactggttctaaattgtcatgcaatgactgttttcccaca ggttgtcagtccattttgacctatgctacctcttacggccttatttgtggcttggatctgtgatcttcacagttgacctg gaaacttgaaaatgagccatcacgtggtaacattaataatattatgattgaaatttttcttgagttgcagttataatttc tttttggacaagcacacatgtgctgtggagatcacactaatctgccatgtgggggacccaaggtggattccctgtggcaa tgccgaagttgagtcagcgttttgtcttactgaggtggctggagcattagagagctttagatccaagaacgagaatgaag acaaggtacaagtttgttagcttggtcataccgcgcactggtagctcagttggttgagcatcgggttatcatgcgggagg ccgtgagttcgacaccagccggaacaacactcagggtcttaaaataactgagcagaaagtgctgcctttgtaattacatc ggcaaatagttagactttcaagtcttctcggataaggactataagccagaggtcctgtctcataacccttgttgtaaata actgtgggacgttaatatataaattccttgataagcatttttatattaaagggaattattaatttgctccaattcctctt tacactcttgttcaagcacatggtattactggacaaactttttttttttattaattttggtagagcttcataatatgagg cgaaagattagacattagctaataaacaaaagcaattttctgggtttctaggaattagtggaacaaatgattagcaaaga tccaaaaagccgtttatctgctacagagttcatgagcaaatacagaggtactattttagtgagtcaactgctttctccat cattggtacgtacagtaccacctactttaaatcttaatttctcatcattatcataatcattttctacctttacctcaaag gtttatccttgttactgacactattgttaacataataaatatcgtaggtcctccctaggacagtagttattagggaacta gtactcaggagctcatctctgtggttgtcccatgtacaccattgaaacttttgttacctgcatagtatttttggcaagct tccaaaaactcagtggcagaggatcagaacataataattattgtgatcagaatgtagtaggtttgactccttttctgcac agcaataaattatttatctaacaattttttgagagcaaaatatctaactcttatgatataattaactgttcttttacata catataagtaactgttcttttacatgacagggatcatctttccagagcagttttacttttatcttagcaagtactgtaca tgagtcaactttgccatgcctcctgagtacttactgctgatgaaaagataagcaggtaattgacttgttgtcaaagagag cgttaggtctgaaaaaataatctaattattataacaagcaaacttacatatgcattatgtaattttgccatgattcaaga tgatttgtaggtgatatgatgattcgtttaacttcattccattagccactgatggtaattgagcatgaaactgtcaattc attttgttctgatttgattttcctgtttaagaatcaaacgtgatattgaccagattttgaaagagctccttccaacaaat gatgttcatgatg |
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Protein
| Protein ID | aug_v2a.24200.t1 |
|---|---|
| Definition | - |
>aug_v2a.24200.t1 FHPKGILVAHLHEHKAAINRIQVSSDYSLLASASDDGSVKLWDLQKLDGRSLINKSRQTHQLTSYNFFLDKHTCAVEITL ICHVGDPRWIPCGNAEVESAFCLTEVAGALESFRSKNENEDKELVEQMISKDPKSRLSATEFMSKYRGIIFPEQFYFYLS KYCT* |
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