Gene
| Gene Model ID | aug_v2a.23327 |
|---|---|
| Locus | scaf16654 : 535 ... 7039 : + |
| To GenomeBrowser | scaf16654:535..7039 |
| Genes list of scaffold | scaf16654 |
Manual annotation
| Study field | Photoreceptors / Circadian |
|---|---|
| Gene name | Adi-nr1d1-1 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein | GO:0016020 |
Transcript
| Transcript ID | aug_v2a.23327.t1 |
|---|---|
| Definition | - |
>aug_v2a.23327.t1 accattataattgttgctacaatgctctggcactgagaacaaaatttgttgatgttgaacatatgtaaagcagcaatggt tccttcagttaaactactgttattgatggtctcttttacggtgaaagcttctgaatcagtccggaggggagaagttgacc gaattttcaaacctggtgatgccatcatcggaggactactgccgctgcaccgaagcagctctaaaaatggctgtgaaaat gtgttccttcctggaataaaccgcgtggaagctgtcctctatgcagttgatcaaataaacaaggacaagaacatccttac aaacattagtcttggctacgatattagagactactgcatggatagagctaaagcaatgcaacatacacacgacttcagca ctcatttgcatttattaatgcctgacggaggaggatccacatacaagagtaattttgtcacctcatgcaatggtacatgt gatgcctgcgtgcaatgtaagacatcgaatgtagttgccaccaaacctgtggcagccatagtgggaccttatggttctcg attctctttacaagtcgctggccttcttcaagttgtaaacattcctgccatcagcccatcggcttcgagccctgagctca gctggtcgttttacagtaagtttttaagagcagttcccccagataaattccaagcggaagctatggcagaccttattgaa ttcttcgcctggagctacgttgccgttattgctgtggaagattcttacggactctatggttttcgtgctctggagcattt gtcacttgaacgaggaacattttgtatcgggcttgtacagtatattacaccaaaaggttacgaatcttggttgaaaccaa tcgttaaaaagcttaaaatggcggataatatcaaagttattgtcctgtggctgggggatactattgctaaggatctaaca agcgaggcacttcggcagaacttaagcgatcgagtttggttgatgagcgattcattgtccactaaaacgcctgcgtttct tggacctgaaatgatgagtcttggtgcataccttggcgttcaacccaggaaatttgatagtcggaattacgaacattatc ttcgaaatctcacgccaaaaattcgcacgaatcaaacagacacaaatccatggtttgacacggtgtggagacaacaagac aattgctccacagaaatagacaaaggatatggtctttgtcccgaggatttaagaatttcaaaagatctttacatgaaaat gtcagacgactttatcccttatcaaatcgactcaatatatgctatagctcatgcacttgacatgatttaccggtgtgaag aaccaatgggtcttttaccaaatggcgcatgcccacaaaccaagccctttgtaagtccggccgacgttctgttgtacctt cgcaacgtaagcttcaaaggtttaacgggaaaaattgaattcaatgaaaatggcgaccctttgcaggcagcgtacgattt tgtaagttttcagcgatcatatgatagcagtgctgcaagtggtggaaagcacaccaaggtcaagataggcgaatgggacg cgaaaggacatccaaaaagtaaaagtcaacccaagtctcatattgtggagttacaaaagcaaacagttccccaggggtac cgctaatgtgtttccaacatcagaatgccatgaaaagtgtcccccgggaaagcgtcagactccaacggtggcatgctgtt ggcagtgcttggaatgcccgcacgacgaggtaaacgctctcaaaggatcaaccacttgtttgaaatgcaaccagactcag aaagcaaacacgaataagacattatgcttggaacttcccattgaaaatatggtgtgggatagtgtagccggcattaccct aatggcacttacaattttgggtttgttttgacctttttcactttcatcgtttttatgcaacattacggaagtcccatagt cagagcagcgaatcgtgagttgagtttggtgctactagctaatattgcaataggttttggtctgcctattataacgattt ctaaaccaacttggctgatttgtgttgtgatagaaccatggcgttatataacatcatctttaagtgtttccttgcttttg ataaagactgtgaagctcctaagagcttttcaagtaaaatatgtggctaagtggttaaaaaaaacaagcggaagcacaac tgggcagttgatatgtgtcgttttgttaaatttgagcgaatttattctggctatattgtgggctttcctagacacgccat atgaagcaactgtgatcgaaaaagaaaagtatattttgaatacatgcagacctcatgaaacggctcttggccgagtgctt gatgtaacaatgttggtctatctgatacttctatcttttctttgttcattctacgcttttaaagcaagatctcttcctga aaattttaatgaagctcgcttcattgcatttgccatgtacattcatcttctctcttggatcactttctatcccatgcgat ggtccatggaaggttggtatgtggctatggtctcgtgcaccaccgccctaatctgctcatatggtttgctagcgtgtatt ttttcgccgaaagtttttgtaattctccggtatccagaacaaaatacgatcgaatttatgagaaatgagttgcgaagagt taacaccacgagtgttgcccctgcaaacgaaaattaaagttcacttttcactggaggcgcaagcataaacacaaagatac acagactcggtagagctttggtcgtcagatatgattgttggaacaaaagatgcagaaaaaaaagccaaaaaaacgggtta ttgcccttgtgtgtgtcactaggttgtgaaaaccgggcaccatttgttcaaaggacagattggatgatactcatcaatgc actggatagtgattcattcgataaatagcatatgcatcatctaatctttgaacaactgggaccaggtctaattattcaaa gtatttgtagttggaaacaataaatatcgaaattgaaaatatggttacgttctttctcagcattacactactgcagcttg acgtttaataaaggatcacgacttttatccatatgctaagacgaaaacgccaactaatggagtcagttcacttttgatac atcgatctaaataataaaaaccttgaaattcagccacaaaaggctatttttgaccattttgccttacgatagcctttgta aaacagccatttttgccgtaacatttttacataagacaggtgtgatgtggttctagctagagtactttgaagtttagctt taactgattttgcttttctgtgcttgccagatattttttccacgtggtatgtacaattgtgtttatgtactgtgtgtaca tatgacagttgcgcatgcggtcttgcagaaacactggtctctactcaagttattttatcctgtacaaagtacgtgcttgt gctcattcgcacaatataaatgcatttgctcatgccaatttgctgaaaaacgaaatcagcgtcattccgcccaactgaat acttgcctttgcttcgatttttgtcgcgtgtttccgtagaacaaatccaacatggttctatagtcgatggatacaaatta atccaccatttggtgtaatctctcatattttttaccttaccttttcaaacaaacagcaaaaagcgttacgccggaatcga tttatacctcgaataagaaacgtgaaaaaataaaacnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttttat tattagcatctgtgattatttattatgtaaaggcttatagactttaatggacattaagttagcaacccccaccccccaaa gaaaaaagttcacagtaaaataaatttcaatatatttctccacatttcattttcttatttctcttttcattccagctgtt caaacaacaaagctaccggctttcccaggcttttcgtttccttacctcaacgatttgtcaggattttactcacctggtct cctgccatttacactctttcaaccagccatgtctaaccaagggagcattcatcaggggatgcttcctcaatcccagggaa cttctgaagtagtatacgaattggctgctcacgtgcttttctcagttgtggactgggcccgaaagctcccaactttcaac aacctggtggaaagcgatcagattacgctgttgaaaatggcctggagtgatttgtatctgttagaaagtgcgcgcagccc catccacatttacatgccgcagctctatgccacaggaaacatgcaaatgaggcagttatccatggagaatattcttaagc ggatggagcatgcccgactatttcaggaccagttggagaaaatccgatccctcgggatggatttgacggagcattttcac attaaatgcgttgtcttgtttaggaccggtaaggataaattgtttacttgttgcacgttacactcaatttagtgtgttta agacttagtctactactacnnnnnnnnnnnnnnnnnnnnnnnnnnggaaatcttctagaagtcacaacacttttttgcag gttgtgtcgtggtgaaggaaaatatttcaacccctcggtgtcctttctcttgaccctgaggaaggctattctccagaatt tccatttgtcctatctgtaaattcatgacggactccattagatattgggcaatgaactttcaaggatatttgccgagaac tttcgctccattggaattatgcctaatgactaaatattaactgttttcgttagatgggtccccaattacgcagccacaac aaatcgacatcctacaagacacttc |
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Protein
| Protein ID | aug_v2a.23327.t1 |
|---|---|
| Definition | - |
>aug_v2a.23327.t1 MLNICKAAMVPSVKLLLLMVSFTVKASESVRRGEVDRIFKPGDAIIGGLLPLHRSSSKNGCENVFLPGINRVEAVLYAVD QINKDKNILTNISLGYDIRDYCMDRAKAMQHTHDFSTHLHLLMPDGGGSTYKSNFVTSCNGTCDACVQCKTSNVVATKPV AAIVGPYGSRFSLQVAGLLQVVNIPAISPSASSPELSWSFYSKFLRAVPPDKFQAEAMADLIEFFAWSYVAVIAVEDSYG LYGFRALEHLSLERGTFCIGLVQYITPKGYESWLKPIVKKLKMADNIKVIVLWLGDTIAKDLTSEALRQNLSDRVWLMSD SLSTKTPAFLGPEMMSLGAYLGVQPRKFDSRNYEHYLRNLTPKIRTNQTDTNPWFDTVWRQQDNCSTEIDKGYGLCPEDL RISKDLYMKMSDDFIPYQIDSIYAIAHALDMIYRCEEPMGLLPNGACPQTKPFVSPADVLLYLRNVSFKGLTGKIEFNEN GDPLQAAYDFVSFQRSYDSSAASGGKHTKVKIGEWDAKGHPKSKSQPKSHIVELQKQTVPQGYR* |
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