aug_v2a.22148: Genome browser

Gene

Gene Model ID	aug_v2a.22148
Locus	scaf14936 : 72 ... 2620 : +
To GenomeBrowser	scaf14936:72..2620
Genes list of scaffold	scaf14936

Manual annotation

Study field	Autophagy
Gene name	TOR5

Study field	IP3 pathway
Gene name	Adi-TOR4
Description	Named thus because a bi-directional best his result was obtained by BLASTP searches. See Homo sapiens TOR (P42345).
mRNA evidence

Annotation by Blast2GO

Annotation	GO
serine threonine-protein kinase mtor-like	GO:0005524 GO:0008144 GO:0016301 GO:0016310 GO:0016773

Blast Hit to nr / sp

query	Subject ID	Subject Name
aug_v2a.22148.t1	gi\|736198664\|ref\|XP_010773847.1\|	PREDICTED: serine/threonine-protein kinase mTOR-like [Notothenia coriiceps]
aug_v2a.22148.t1	gi\|291238339\|ref\|XP_002739087.1\|	PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein kinase mTOR, partial [Saccoglossus kowalevskii]
aug_v2a.22148.t1	gi\|410899072\|ref\|XP_003963021.1\|
aug_v2a.22148.t1	gi\|583980975\|ref\|XP_006785798.1\|	PREDICTED: serine/threonine-protein kinase mTOR-like [Neolamprologus brichardi]

Transcript

Transcript ID	aug_v2a.22148.t1
Definition	-
>aug_v2a.22148.t1 atgtttggctctagtcttgacgactaccttcacctgcttgttccaccagtcgtcaaattatttgacagttctgatattcc gctcaccgtcagaaggttagtcaataaggagtttaaagagctacgaaggctgatgcaaagaaaacgacacgttaaagtag aatctcgctgaaggttaaatgttttgcgatttttccatgttgatcacgttgtaagaaataggccaagcgtcttttcactt gatttgcactaacggttttcatttaaggacgttcgcgccaaaatcttcctacggtgagattttcttcatttctcccctag agttagttgataaagtacttactccaaaaatgaaaaaaaaaatgggggtcactgactttgtttcggagaaaatggcagtg gaaaaatgccttaatttcgataaatcgctcataataacgagatgtagtctcctctgctaatccctcgaaaatcctaaaaa taacccgttagagtgaaggtttccgtgcataggtttttaggggtgggattttaagataatttaatgccgctaaggatgtc gtaaacagtagagttcatcctcgacgagcgttttcgtaagctctatcaattacaaccactaccggaattcgatggcacga ggaaagaaaatctaaaaaaagataacttcttacggtgaaatttttttcattttatcatattttgtagatagtaagtagag taagtgattcattattaaaaaaataggggtcacctatgatccaaaggaataaactcggcctgaaagtttttcccccggcg ttttcgacgccatgtttatcttcgggacctgtcaatcgtagtgatgcgtgacatattacagtcgcgttacctgcgcagaa gggttgcgcacaaacaattagcgcgaacgtccttaaaagcgaaaaaagaaagattttctgctgtgggctcgcgttctcat tagagcttaaagatgtgaaattttcacattgtcgtttggaagactacttcaaaaaattgcaactattagcgtgccgcacg tgcagcacgattaattttcctcatttgaccaatcatataattgatgtgtgactttattgttgccgttgctattgccgtct tcgtttcttaaacaccttaactgggctcgtcacacaattcacagcaacctacgtgacaagccataaaaagcccatcatat tgcgaaaacgaattggttgtggagtcgttgttaatactgtgccattgattttacaacgtcatatccaagtttagtcaaag ttttaatgattactatgtatcaagtttttattgacgatttcgcagcttcctgagcaacgtacattcttacttcatgttat caatattagtctgtcttgttcacattcctcagatgcgctttggaaaccctggagcgtctgagtgagtcattggatctcac agactttgcttctcgcatcattcatccaattatcagaacactggactcgtgtccagagctccgctccacggcgatggata ctctctgctctctggtgttccaactgggaaagaaatattccacttttattcccactgttaacaaggtaacattctagaca atttggtatcaaaggagtcgatgaggatcaaataaccaccctaaaaagatagcctgcagtgcaggcgtattttagtggtc acacgcacggtgtgtccttcgcggaatgtttaaccgccatcttcctaatctttgattactactagnnnnnnnnnnnnnnn nnnnnnnngtctgccttggggtaagcaaagttaaagtgtagtctattatcatacaaactaaacttttcccattttatttt gctcacaggtcctttccaaacaccgtatccagtgccagcgttatgacattctgatttgcaagattgtaaaggttggttta cacgtgttattcacaatattagagagatttagcatcgcgtttacggcaaacggcaaacgtcaggctgaaatttcccgttt accaaaaactggtgaaatttatttggtttcagcttatattttgcctgttagccacagctatggagcaagtactaaaaacg gcaggctgctgcgtgtcgtaaaagcaagaaaattatcttattctagcttatttctctgtttttagtcttttctttcttat ttttgactttagtttttgactttgactttagtttaacagaatgcattttttactctaacgaaataacgactattaaagaa ttataatgtttaaacaaaggaaacaggtcaattccaattccaattttaatgttacattttttttgcttgtcgtgcaattt acttttttttgtttcagagcccatttttgttggattgggaaaacgaggtactttctcgtcgacaaaaagctggaaaaggc aacttggctgatgactcggcaactactgcggctattgaagctgcaagcatcaagaagctgacattcaaggcagacagtct tcagagagtacgccaaagtttattgctaatgtgattcgtatgcattcagaccgtagtttttaagcaatg

Transcript ID

aug_v2a.22148.t1

Definition

>aug_v2a.22148.t1
atgtttggctctagtcttgacgactaccttcacctgcttgttccaccagtcgtcaaattatttgacagttctgatattcc
gctcaccgtcagaaggttagtcaataaggagtttaaagagctacgaaggctgatgcaaagaaaacgacacgttaaagtag
aatctcgctgaaggttaaatgttttgcgatttttccatgttgatcacgttgtaagaaataggccaagcgtcttttcactt
gatttgcactaacggttttcatttaaggacgttcgcgccaaaatcttcctacggtgagattttcttcatttctcccctag
agttagttgataaagtacttactccaaaaatgaaaaaaaaaatgggggtcactgactttgtttcggagaaaatggcagtg
gaaaaatgccttaatttcgataaatcgctcataataacgagatgtagtctcctctgctaatccctcgaaaatcctaaaaa
taacccgttagagtgaaggtttccgtgcataggtttttaggggtgggattttaagataatttaatgccgctaaggatgtc
gtaaacagtagagttcatcctcgacgagcgttttcgtaagctctatcaattacaaccactaccggaattcgatggcacga
ggaaagaaaatctaaaaaaagataacttcttacggtgaaatttttttcattttatcatattttgtagatagtaagtagag
taagtgattcattattaaaaaaataggggtcacctatgatccaaaggaataaactcggcctgaaagtttttcccccggcg
ttttcgacgccatgtttatcttcgggacctgtcaatcgtagtgatgcgtgacatattacagtcgcgttacctgcgcagaa
gggttgcgcacaaacaattagcgcgaacgtccttaaaagcgaaaaaagaaagattttctgctgtgggctcgcgttctcat
tagagcttaaagatgtgaaattttcacattgtcgtttggaagactacttcaaaaaattgcaactattagcgtgccgcacg
tgcagcacgattaattttcctcatttgaccaatcatataattgatgtgtgactttattgttgccgttgctattgccgtct
tcgtttcttaaacaccttaactgggctcgtcacacaattcacagcaacctacgtgacaagccataaaaagcccatcatat
tgcgaaaacgaattggttgtggagtcgttgttaatactgtgccattgattttacaacgtcatatccaagtttagtcaaag
ttttaatgattactatgtatcaagtttttattgacgatttcgcagcttcctgagcaacgtacattcttacttcatgttat
caatattagtctgtcttgttcacattcctcagatgcgctttggaaaccctggagcgtctgagtgagtcattggatctcac
agactttgcttctcgcatcattcatccaattatcagaacactggactcgtgtccagagctccgctccacggcgatggata
ctctctgctctctggtgttccaactgggaaagaaatattccacttttattcccactgttaacaaggtaacattctagaca
atttggtatcaaaggagtcgatgaggatcaaataaccaccctaaaaagatagcctgcagtgcaggcgtattttagtggtc
acacgcacggtgtgtccttcgcggaatgtttaaccgccatcttcctaatctttgattactactagnnnnnnnnnnnnnnn
nnnnnnnngtctgccttggggtaagcaaagttaaagtgtagtctattatcatacaaactaaacttttcccattttatttt
gctcacaggtcctttccaaacaccgtatccagtgccagcgttatgacattctgatttgcaagattgtaaaggttggttta
cacgtgttattcacaatattagagagatttagcatcgcgtttacggcaaacggcaaacgtcaggctgaaatttcccgttt
accaaaaactggtgaaatttatttggtttcagcttatattttgcctgttagccacagctatggagcaagtactaaaaacg
gcaggctgctgcgtgtcgtaaaagcaagaaaattatcttattctagcttatttctctgtttttagtcttttctttcttat
ttttgactttagtttttgactttgactttagtttaacagaatgcattttttactctaacgaaataacgactattaaagaa
ttataatgtttaaacaaaggaaacaggtcaattccaattccaattttaatgttacattttttttgcttgtcgtgcaattt
acttttttttgtttcagagcccatttttgttggattgggaaaacgaggtactttctcgtcgacaaaaagctggaaaaggc
aacttggctgatgactcggcaactactgcggctattgaagctgcaagcatcaagaagctgacattcaaggcagacagtct
tcagagagtacgccaaagtttattgctaatgtgattcgtatgcattcagaccgtagtttttaagcaatg

Protein

Protein ID	aug_v2a.22148.t1
Definition	-
>aug_v2a.22148.t1 MFGSSLDDYLHLLVPPVVKLFDSSDIPLTVRRCALETLERLSESLDLTDFASRIIHPIIRTLDSCPELRSTAMDTLCSLV FQLGKKYSTFIPTVNKVLSKHRIQCQRYDILICKIVKSPFLLDWENEVLSRRQKAGKGNLADDSATTAAIEAASIKKLTF KADSLQRVRQSLLLM*

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OIST Marine Genomics Unit since 2008