Gene
| Gene Model ID | aug_v2a.21602 |
|---|---|
| Locus | scaf14206 : 508 ... 5160 : + |
| To GenomeBrowser | scaf14206:508..5160 |
| Genes list of scaffold | scaf14206 |
Manual annotation
| Study field | Autophagy |
|---|---|
| Gene name | ATG18-2 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| wd repeat domain phosphoinositide-interacting protein 2 isoform x2 | GO:0000045 GO:0000422 GO:0005634 GO:0005776 GO:0005829 GO:0006497 GO:0006995 GO:0019898 GO:0032266 GO:0034045 GO:0034497 GO:0043234 GO:0044804 GO:0080025 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.21602.t1 | gi|156376960|ref|XP_001630626.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.21602.t1 | gi|260808935|ref|XP_002599262.1| | hypothetical protein BRAFLDRAFT_275183 [Branchiostoma floridae] | 0.0 |
| aug_v2a.21602.t1 | gi|72014139|ref|XP_781358.1| | PREDICTED: WD repeat domain phosphoinositide-interacting protein 2 [Strongylocentrotus purpuratus] | 0.0 |
| aug_v2a.21602.t1 | gi|555950361|ref|XP_005887383.1| | PREDICTED: WD repeat domain phosphoinositide-interacting protein 2 [Bos mutus] | 0.0 |
| aug_v2a.21602.t1 | gi|594039485|ref|XP_006044331.1| | PREDICTED: WD repeat domain phosphoinositide-interacting protein 2 isoform X2 [Bubalus bubalis] | 0.0 |
Transcript
| Transcript ID | aug_v2a.21602.t1 |
|---|---|
| Definition | - |
>aug_v2a.21602.t1 gttcttcacacaataagagacacgcctcccaacccctcaggtatgagcacatgcaatgtgtgaatattttgtttacctct gttgtaattcaaaactttatgagaaaatgaattagagaataaaagtattgtgtaagtcagaaaatttttgtgtgctgcat gtaatcaaaagatgcctccaagaaaatacaacaactttttttttttttgtcaggtctttgttccctttctgtcaactcag acaactgttttctggcttatcctggaagtaatcaggtaggcaatcattgttattttcagctggttggtgtggagatcttt gaagtactcgcatgtagaaaatcactttattataagaactggagtgctttatagggatttccacaactgagaaaaaccgc atctccatacatgacaaattaccataatttatgagtgtttgagatgaccaatcagctgctgactcatcacttgctctatt tagtgcctggaatgaatggcgatgtgaataaagtggacttcttgttagttagttgtttatataacaaacaaaataataca tggttacagggaaatatggaataactcttcaagtgttcaactttatatctcacnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaatgaaggctattgtttatttaaccaataggctgtgttt gttattgtttatttgtttttgctatcagattggtgaagtccaaatctttgactgtgtaaatttggtaagtactgtaccat accatgacttttttgaatttactgagctgattaacgaattaatgattgagttttctttgcagagagcagtaacaatgata ccagctcatgattcccctgtagctgctatggcatttaacagtgctggtaccaaactgtcaactgcatcagaaaaggcaag ttagaaaaataaccccattgcaggactcagtttcctaagtcatttcgagaaatgcatgcaataatgatcacatgcatttc tctttcatcagcatgtgtctaataattattattagatacatgctgatgttatataagcaccgcaaggtgtccccttacct tttgcattatcttgctccatcacttttggcgagatatacatcaaagatgcaaaaacagcaaccacaaagccaagctaaag aaccaaaacgttagcactaaccctaatgttgaaaaaggtgatttacatatgtttagatgtactgtagtaagataccttgt ggcacatatcaacataattaagcacacgtgtactggacattttaagtgagtttcgttagattttgtttgctctttatgga tttttggccctcattgctgtgtttggagatcacagttttctgctttaattattaatagagttttaacttctgagaaataa gacccgggggaattgtgcctgccatctgaccaacccttgacataaagaagaattgtagaggttgttggtcctaaacctta ccagtttcacaatgtctaaaaaagatgattttggaaagaaactggagtcaaagatacccagattagcataaaaataacat ggagcctttgtgatgagttctttcctgtgattgcttttagctatccacctgttcccttagggattcattgagtattacca taaaattatctcagttggacatgttgtacccttgactattaggacttcaatggcaaatttcttattatgtttcatttttc tagggtacggtaatcagagtttattcaattccagacggccagaagctctatgaatttcgacggggagtaaaacggtacag ggagaaagatttttttttttcagtgtgaaatatactgtcattggggagcttaagcaaccacgacgacgacgccaacaaaa aactcacaaatttgcatatttgacagtaaaaaacagtatttttgcacgctttgcacgtgcatatttcatcttttgacatt ttgcagacgttctcgttctttctacgacgtgaaatgacctggcccgggttgctcgaagcatggttagtgctaaccagcgt taaataccatggaaacctataggttttaatagctcttaaccaacggttagcgctaaccaggcttcgaacaaccggcccct gttttgcagttgtgtggacgacgtgagcatatgatgacaaatgttaatttttgtcttcttatgtcccaagcgctggttcc aatttaattccaggatagttagaacacaattttcaagcataatgactttgagtaattgaaaaatgattgcagaaccgcga agtgacattttcagatgacgttctcgcttacgtcgacgccgtgtttgcttaagctccctattgtgaatattgcgactgaa cttcatctttcctttgattttcagatgtgtcaccattttttcattggctttcagccatgattctctgttcttgtgtgcat caagcaataccgagactgtgcatatttttaaacttgaggctccgaagaaagagtgagtttgtgaattcaatatctcaatc caggattgcaaggaattagatgccaaattttgataatcattaacaagtgtctcattaaaggagctaggtcacgcaatttt aggcaatttcagcattgatcaagtggtcatagaattaactgaaataacaaaataactgctcaaaactatagaagaactca aacaaaacacaggaaagctaagaagggacaaggatggacaaaactggggaggattgaaatggattgcatttgggtaaatt tgataaacgtcggcccaccttttttcaaatttacataagtttatatcaaaatgtcatttaaacagctggaaaatcattct cagttgttttgtggccgtgattctgaaaatgaaagacttgctctgccaatttgacgtttagagctcataactaataaaat aaaacaaaattacctaaaatggcgtgacctagcccctttaagtcaaagccaaaccttcctgtttgtaagatcaaggtttc tgtttgtgtgtgggctatttcttaggttaagattagatgacaagggatttctttcttcttgtggagttctgttagggaga cacttcatgaccttaaatttgtctgtaatgtgtgttcctcatcacaagcgacactgaagttgagttagagtgtcagggga cactttgtgaggcatacatcaaattacttgccatcctgagcatatctgtaatttgaaataaagagtttttacctgcattc aaactctgctggtgaacatgcgtgcattttatgtaaatcaagaagcatatgtcttaataacaagaaaatccacttattgt gataaagttagcacttgtagttagaaattgaaggtatttatgcagtgattaaaagttttgtacctgccacctctttgaaa cttttgacccttttaacgtgtcctttttatttttaactgttttcatctgaagttcttagcttgacttgcaggcctactga cgaagcagctggatttatgggttattttggcaaagcactctctccaacgagttatcttcctgtgcaggtgaggaaaatta ttttgtcatttttgcagatctgtttgttctgtttcccttgaatttgctggagttcaatgtaagctgatcttttcgacact atgattgatttgcagatggccgaagtattcaaccaggaaagagcttttgccagtgttaggttaccacaagcaggtacttg tgcaaaggcaatgataactaagctagggccacttcggtgaagctaaatcaatagggagcctaagcatgcaatgtttttta gccacggacggcaaccggaagtgatcattttgcaggcaaggacattggtctctccaagattttcaaagtaatcgtctcta aagctcaaagagactttaaaatataaatgtggtagcgtgaagacaagtaaaacaggaaaacagtacacttccggtgtccg tccgtgattcaaaaacgttgcatgcttaagctccgtaatgcgtcaccatgaccatcgaccggaagtccgtcttcctctta tcgagaagtttcatgcataaattttttctcggtacagaaacaactcgtcttgaccgttttcattgattttctttcctcta caggccttagaaacgtttgtgcaatttcgatgtaagtatctttttgtcgtcgttcgcagtggttgtttgttaaagctttc tttttaccccgaagcttttctttttaccactaacaacctttctctccccacccacaaaggattggcaagctcccacgact gctagtctcaagt |
|
Protein
| Protein ID | aug_v2a.21602.t1 |
|---|---|
| Definition | - |
>aug_v2a.21602.t1 VLHTIRDTPPNPSGLCSLSVNSDNCFLAYPGSNQIGEVQIFDCVNLRAVTMIPAHDSPVAAMAFNSAGTKLSTASEKGTV IRVYSIPDGQKLYEFRRGVKRCVTIFSLAFSHDSLFLCASSNTETVHIFKLEAPKKEPTDEAAGFMGYFGKALSPTSYLP VQMAEVFNQERAFASVRLPQAGLRNVCAISM* |
|