Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaug_v2a.21533
Locus scaf14130 : 34409 ... 39528 : -
To GenomeBrowser scaf14130:34409..39528
Genes list of scaffold scaf14130

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
aug_v2a.21533.t1 gi|156390771|ref|XP_001635443.1| predicted protein [Nematostella vectensis] 0.0
aug_v2a.21533.t1 gi|585660975|ref|XP_006816485.1| PREDICTED: uncharacterized protein LOC102801825 [Saccoglossus kowalevskii] 6.0e-22
aug_v2a.21533.t1 gi|260795091|ref|XP_002592540.1| hypothetical protein BRAFLDRAFT_69057 [Branchiostoma floridae] 2.0e-21
aug_v2a.21533.t1 gi|390335010|ref|XP_003724052.1| 2.0e-20
aug_v2a.21533.t1 gi|676426087|ref|XP_009044511.1| hypothetical protein LOTGIDRAFT_109768, partial [Lottia gigantea] 2.0e-15

Transcript
Transcript IDaug_v2a.21533.t1
Definition-
>aug_v2a.21533.t1
aaatatcagtattgtgttgcagctgatctggttagctggtgaggagtccgtcgaagtgatttttttgcgggtaccacttt
ggaaaacttgagtttagtaagaaaaagagatgataacagataagaaggaatatgagtcggatagttttgtgaaaaaagaa
gaagagcattcgacagcgtggaagaaaaatcgacggcgaatgtcaggtgtccttagtttcgatgctgtcgacgatcctaa
cgtcaactcatcgcagatgaatgcggattatttatttgcacccgcgcgaagccacaggaatggattttctaagagcatgg
ttgatctttcatcgtataggagcataaatcgaaaaagcgtgatgttcgaagaagatctctttgctcacaaagaaattata
caacgagcaagacaccggttcaaagaattggagctcaagtacccagagatttttaaaaattcttccaaaaccccttcggt
tttatcatctagtttaagtaggcagtcagtgagttctgattgcgccgagttgtccaaactaaaatcagtggagcgaaaag
aaatacaaacagtgaaaatagatactttacaagtggaaccaagtggtgagaatgatcgggactcttgtgccgctgtcact
atatcgagaacaagaccgccacctctctcagcggccatgaaacatcataacctcgaggatagctgtgatagtgcgttcga
tgaagcagaccatgatcgagactccttgcattcgaagacgtctcgggaaccaacaccacctagcatggaggataggagac
tctttctctatccgggcgagagtgtcgaatcagacaaggacagtggaatttccactgatccttctcataagccacattcg
aggcctgctagattggaaagatgctcagatactggactgaaggacaagcaatactttcctctgaaatcgaaaagtttgac
agcgttatcgtctcctaggagaaattcccttgagtatcagggggcccattttgataacacgctaaggcagagagttgata
aacgcggaattcttaaatctgtggcttataggaatcaagaaatcaaagctgacagccttgatatccctgattgtgctgcc
agtcctacacactgccaaggaagagagagccggagtggatcactgtcaagcaacattcgaaggggtaagttgttttgaaa
tgtttcaccatctccgccttttttatggtgcaatttagattgggaaggttttgatttcttttcgtggaaatttaaattac
caaaatttctagatttcacgcgagactaactcactaagtgttcactctaatggtaaattatcttactgatttcctggagc
gcccagaaacaattggcgaaaaagtcgctccgaggttcacagcatgtcttgactcaagtattgtttttgcattgtgtaaa
atctagaccgattgtgtaacagtttaacagaactattcattttactttgcgggtgaagtttttaacactgacccgtcaat
ttttcatcgtgaacaaatgttgcgaaacgtgcatctggcttataggagctattagccttactcacaatgtcttccaatgc
aaaggaaatttgaaaatggtattatcactttggcagactttcaaggaagtataaagaaaagcctccacaaatttcacaca
tgaaatggatcaaattttgctatttttgaaacgttcaaccttttaggttcacaagaataccaaacaatatactcttgggg
gcgcccacactccaggaagcgtaattttaatggatttcaaatccattaaatccatggttatatttcctcaaaatcttagg
actcactggcagagacaagctttaatttatttttgttgtcattttgttctgtgataagcatttaagtctggatcgaagtc
gacacatttttctttactgtagtacaaatttttgtggtgccattttcataggcggtttatttttaaaacaatgaacgttt
aatttttttagttctcttccggcaatatttaaaacatggcttgcttccgtgcgttgacacaaaagtgattttttttgtga
gatattaatctaaaaatacttatattgaactcaaaatagcaaagaacaaccgaaaagattggaattgatttgttattggt
tcacggcaagtgaatctcgttgaacgcgcaaattgctcattttaggttttgaccggtacctcgtgtgcagttagaccaaa
gaggtttttatcactgcattagatgtctttacttggaatgaattgttgggtttaaagggccgattcatttaaaagtaaag
gactgtatttcgagtttattcagtaattacaccttatctgaatcgtgggaactcattggctgaaaagcatactttccttc
ttccatataaattgctacatatattcagggcatccatgatccgagaatgggattatcaaaaggcaggtgttttgaattta
aaataggtcttcttcatcaaacaagacaagcaacgcgattttcttttgatgttcgttatgttaacgtgatgtccagttat
cgtgcgaacaattttttcagattttttttatcgctgaagctccgtgagatatgcaatatatttggggcaaaagttcttct
tcctctcacgtaagcaattaatttttgtaatacttccctttctgagggcttaaaatacagcaattaatttatttttagcg
caaacatgcgtaggtttaaaaggatgcagaaaaggttattagatttggatgaaaatgtaatttcaatgtaattttgaaac
cgagcaaaagtgaatagaggatgggaaaaggaaatgaaatggtggtattatattgaagcagtaagtgtttgaaaaacagt
aaattgtccgaaagtttatgcagatcgaaagcgaaagtattgttcttccaagtcatttaaatacgtggttatttactcgg
aattttgtaataatattgtcccaccaagataggcaaacaatttataaaacagtgatcgttttttatgtattttcatactt
gttctttatgactgagtttacatttgttcgaatttaaattatctgtagcgtttaaaatgtaaaatacgaataattgtttc
acttgtctttttgagcaataatatcttgtgtgtaaaagtggataattatctttaaacctcaacctagtgataacattttc
atgtaagtttttttttccgaagctcctcaaaatgaattgacttcaaatgtaaaaaatacaatttatagtgattggttgaa
gagtggagatgttgaaatgaacatggacctttagagtacaatattctcaaacattgctttcaaaatgttaatgcaattct
gtgttctggaaaaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgaatgaaactggatgtttttgtcacattttgcaggatc
cagcatatatcgtaggagcattttatcgggcagtggaagttttagtggaagtcaagatgaacctgattctgataatgaaa
ctgtctacagtgttcagagtgaattcattttacgtcctcacatgtctgcacgggaaagatacttcagcacataccagctc
aaaccaatttctgaaactgataccagagatctcaccattcatcaaaaatggagaagtatgccagatcttcccaggagcaa
tagccttggtagtgttggcctatcatcatctttccgtgattctttgcaagctggttttgatgaaaagaagaggaaaaaga
agagaaaatttggtcggcgatctggtctatatatcgtcaatgatataccagttagtgagaagccaagattatcaactgat
aaggacaaaaggagaagcaagattttcagtaagagggaaaaaaagaggtccttgcatgtgaatgagttgaccaagaaatg
gtttgactctcaaactgctgtaagcaaaccaacaggtggacaaagtctgggaaaaatcattgcaatgcgagaagatcttg
gcggagcgtatgtgttagaattgcagaggagccctggtggcttgtttggattttttattcaaaagggatacaaacagtac
aggggtggagtttttgttagtcgaattatggattgctctgcatcaaagttcatggctggactacttaatcctggtgacga
gattttggaaatcaatggagaaagtacatcaaacaagaccatgtcggaagtacacaacattttggcaaattcagacaaac
tcattctcactgtgcttcctatgcttggtaggaaagactggtaatagaaatactgtcaacttacctttgagcggtactgt
agtattgagaaatttcaaaattatatggaattttttcagaagtaatctttgtcagtgagaatatttaataaataaacccc
taacaatggctggtgtgtcagataatgcccaaggtttaaagattgtccaaaaaatgaacatttggccgagcagcgaagct
tcggaggcaactgtgaaattttgaggacaatctttcagccaagggcattatcctctgatatgccagcaagccggaaaggt
gtttatttattttataatcctccaaataatttctcaaggcaaatgcacgtaggtcgtttctgtatatttcgtggatttgt
gccaaattgtcaaccagccttttaatgtcactgtcactggcttctgcaaaatgtattcttttgttttccatgaccaataa
tattaaaagattagcttgaacacttgctcttttcttggcctttatccagtcaaaataaaatcagacaacggatatcaaat
cggacagcagataccgtctgataacctttgtccgattttgtatcacatcaccagttctatctaacgagaaccggaagaaa

Protein
Protein IDaug_v2a.21533.t1
Definition-
>aug_v2a.21533.t1
MITDKKEYESDSFVKKEEEHSTAWKKNRRRMSGVLSFDAVDDPNVNSSQMNADYLFAPARSHRNGFSKSMVDLSSYRSIN
RKSVMFEEDLFAHKEIIQRARHRFKELELKYPEIFKNSSKTPSVLSSSLSRQSVSSDCAELSKLKSVERKEIQTVKIDTL
QVEPSGENDRDSCAAVTISRTRPPPLSAAMKHHNLEDSCDSAFDEADHDRDSLHSKTSREPTPPSMEDRRLFLYPGESVE
SDKDSGISTDPSHKPHSRPARLERCSDTGLKDKQYFPLKSKSLTALSSPRRNSLEYQGAHFDNTLRQRVDKRGILKSVAY
RNQEIKADSLDIPDCAASPTHCQGRESRSGSLSSNIRRGSSIYRRSILSGSGSFSGSQDEPDSDNETVYSVQSEFILRPH
MSARERYFSTYQLKPISETDTRDLTIHQKWRSMPDLPRSNSLGSVGLSSSFRDSLQAGFDEKKRKKKRKFGRRSGLYIVN
DIPVSEKPRLSTDKDKRRSKIFSKREKKRSLHVNELTKKWFDSQTAVSKPTGGQSLGKIIAMREDLGGAYVLELQRSPGG
LFGFFIQKGYKQYRGGVFVSRIMDCSASKFMAGLLNPGDEILEINGESTSNKTMSEVHNILANSDKLILTVLPMLGRKDW
*

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495