Gene
| Gene Model ID | aug_v2a.20796 |
|---|---|
| Locus | scaf13141 : 1516 ... 5574 : + |
| To GenomeBrowser | scaf13141:1516..5574 |
| Genes list of scaffold | scaf13141 |
Manual annotation
| Study field | Autophagy |
|---|---|
| Gene name | VPS34-2 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| phosphatidylinositol 3-kinase catalytic subunit type 3 | GO:0000910 GO:0005524 GO:0005942 GO:0016303 GO:0030496 GO:0036092 GO:0046854 GO:0048015 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.20796.t1 | gi|704265865|ref|XP_010152500.1| | PREDICTED: phosphatidylinositol 3-kinase catalytic subunit type 3-like, partial [Eurypyga helias] | 2.0e-39 |
| aug_v2a.20796.t1 | gi|62089582|gb|AAH92169.1| | Pik3c3 protein [Danio rerio] | 2.0e-38 |
| aug_v2a.20796.t1 | gi|147900750|ref|NP_001086836.1| | phosphatidylinositol 3-kinase catalytic subunit type 3 [Xenopus laevis] | 3.0e-38 |
| aug_v2a.20796.t1 | gi|512809659|ref|XP_002935097.2| | 3.0e-38 |
Transcript
| Transcript ID | aug_v2a.20796.t1 |
|---|---|
| Definition | - |
>aug_v2a.20796.t1 ggaggatgggagtgtacagtgaggaggaaaatgttgggaaaacaacaggactttgtcaacgccattgttcgacttgtgaa agaagtatcccaatttggtggcagccgcaacaaaaaggttagtctggtcatatgacaaagtttctttgtttgtttagctt ctggggcaaagttaaagacagtttccaggtactcactagttaccagagagattgtctttctctttttcaagaacatgagt gatgttgatcatcattacatgttttgttcttttgcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnntttagtctttcaagaaaataataattacaataatttatttcagatcaaacaaggtttgaatgtttttagcctaaa cttttgaccttaactggctgataactatagtatgtcttgttggtcagaaagctctatacaacctggatttgtaattttga aataatttattctttctttgagtttcaatatttgatcactattagccatgataatattatccctttgtaactttaaaaaa tcacaggaaaaccggtaaattatgcttgtatctgttgcttttcagagaaagcaagtctctttaaaagtcatctgatgcct gctaaactcacatttttgactcaggatgatcacgaatatgtggtaagacaaaaataatattcattagtaaatttttacct caggataatgattttccagctttctgattggttccctaagcccatgatatgagccattattgttaagtttgaccaaataa ggaaaaccaattttcgcgcgttttgattggctcccataactcggaatatctttggttattcactgttttgtgaaccaaga gaaaaatggcgcgtcgttttgcaaaagtattagaagaagaaattgaagaagcgtttttttatccatctgatttggtaaat actaaaacaactatccccctaagggtcggtgaagagtggtggatatacacgcttcgcgtcttggtatatatccaccacta gtcacctccccttcgggggatagttgtatataattcaactatttatgtcaattgttctctcagtcttttactattatcta attttagaaaaagctttttcaatcaacaagggatgtgacactttttgaagttttcaattagctgatctggctccttttgt gaaaaaaagtacatcttggagctgtacattagttaatcacatgacagagtaaatattgtattactttatattgttcaata ctaccaaaactgtagggttgcagagatttaactatgatagcccagagaaacttgtgtaatgtttgcatgctctttcactg agctctgtgctgagactcaaggaaggaaggctgtccaactacattgcttcagccaactacttagattgtttttctttact cttagaccaaagttataagtttgctggtgaggaaacaattttttccaaccataatcctcacacatagtgggatttattag ctggcaaaacaagtgaattttgatttctgggtttgatgtcagtgggcaatgtttagtaataattattgttttgtttgctg gcagacaatatttaagaatggtgatgacttgcgacaggatcagttgattcttcagattattagacttatggataaggtaa caactcagaatggaatgcatcattaagtttaacagtacatacatagtactcatttcacattattttttggttaatgcaat gctttgcaagatttcaacccttgtgtcttgttgttgttgttgttttcaataagggagctttttctttttaaggaaaacag agccagaaattttacagtgtgcagaaaatttatttattttcttggagacattctagccaaacatgtttgcaatggtgcac tcattgaggatccctttcttttaacgtgccacaccgtatgaccttaggggctcttatattttatctcttcctaaatgtaa cacaacatcatatggacttaactcaattagatatttagggccaaacttatggaattttctaaaagataatataagattat cccaggatttaccgtataccgtaagttcatttaagaacctgattttcaaaattgactttgttgatgtgtagtaataatca taaatattttttatgctactcaattttatcccattttagttttgagtattttaggtacttagtatttagctttggtagtc ttagctcgctcgaactatcacctgtgctatgtattgtaggtgagtttaaataaagatactcacttacagtttgttttgac tccttgtgtgaagaagatcttaagttcatctatcttctgatttcctcattgctgtttctcagttattaacacaatcttgc aaccaacagcagtggctgtctttatctttctttactttttcctttttaattttgaattttcatttaagctcttgatgaag gaaaatttggatctgaagttgactccttacaaggtcctggccaccagtggaactcatggtatagataatataataaaaat gtatcgataatacttaatacttgtaacatgcattttaacatgatgtgatgatcaaatgtgcaaaataataaacaaaacat aaacactgtaacacatacataattacattaaaatcattaattttgctaaattaaaaaagacaatttgaagagaataataa ttaattttaatgggtatatggctgagccaaaagcaatcagaaattattactcaccttgattgaaaaagatcatctgatca cccagatgatctttttcaatcaaggtatgttactcctgggttcaaaccattttcttagaaattattactgtttattctgg tttgcttaaatgtggtgttggactcttttggtgtcctataaatgacctttaaaattaaacttatgataatgtcatcagct ctagaacttttggtcttaaattttattaatgaggtaatttgattctttacagcattaggttgccaagtataaagattcac aggtcgttcaaagggtggttagagctatccactggatgaagccctctgcagtggataactctgacaaatattgtttttgc ctgtattgtatttatccatgggatagttatttaatcagttgatatgtacaacgtaacttttgaactaccaaggccgatgt aaactagtgccattcccacaacgtgtggaagagctgttaatagtttggaatgcgcttcggagctgcatagttgcatgcat tttggttagtcgtgctttccttgaagacgctattagtttataatattgataatgtccttgttatacaggttttgtccagt ttgttgaatctactcctgttgctgaagtactggacaaagatgtggatggaagcattcag |
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Protein
| Protein ID | aug_v2a.20796.t1 |
|---|---|
| Definition | - |
>aug_v2a.20796.t1 MGVYSEEENVGKTTGLCQRHCSTCERSIPIWWQPQQKEKASLFKSHLMPAKLTFLTQDDHEYVTIFKNGDDLRQDQLILQ IIRLMDKLLMKENLDLKLTPYKVLATSGTHGFVQFVESTPVAEVLDKDVDGSIQ |
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