Gene
| Gene Model ID | aug_v2a.19516 |
|---|---|
| Locus | scaf11555 : 479 ... 2677 : + |
| To GenomeBrowser | scaf11555:479..2677 |
| Genes list of scaffold | scaf11555 |
Manual annotation
| Study field | Cell Cycle |
|---|---|
| Gene name | Adi-cdk17-2 |
| Description | Named thus because this protein shows similarity with Homo sapiens cyclin dependent kinase 17 by the BLASTP search. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin-dependent kinase 17 | GO:0004674 GO:0005524 GO:0006468 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.19516.t1 | gi|156403969|ref|XP_001640180.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.19516.t1 | gi|154147579|ref|NP_001093739.1| | cyclin-dependent kinase 17 [Xenopus (Silurana) tropicalis] | 0.0 |
| aug_v2a.19516.t1 | gi|148229292|ref|NP_001080154.1| | cyclin-dependent kinase 17 [Xenopus laevis] | 0.0 |
| aug_v2a.19516.t1 | gi|591349477|ref|XP_007069283.1| | PREDICTED: cyclin-dependent kinase 17 isoform X4 [Chelonia mydas] | 0.0 |
| aug_v2a.19516.t1 | gi|432861269|ref|XP_004069584.1| | PREDICTED: cyclin-dependent kinase 17 [Oryzias latipes] | 0.0 |
Transcript
| Transcript ID | aug_v2a.19516.t1 |
|---|---|
| Definition | - |
>aug_v2a.19516.t1 gtcttgcaagagcaaagtccgtacccacgaagacatactccaatgaagtcgtgacattatggtatttttttatgccccta acactgtcccctcaatcttttatccccaccacacccgtgtcagttcgtttttcggcattcgcgaattgtgtgttactctc tcaataaagcattgcctggtgtcgtatttgcctcgactccgttaaacaagggttcgggtattttccgagtttgtaccagt cattatcgattgatttgcgtctcatcgtgtatctaccgggcaaaaaattcactttaatagatcgtttgcgtgtgacgtca caatggctgtgttagtggacctaaacaaacaaatggttgccatattagtattagaaatatcccatatgaaaactctttag taagccagtttgttattctcatttcaaccatttcaacgaagttcgggtctggcagaaaaatacggtcacccaaacaaacg aaaatagaatgattcccacccctccctcccctaaaaaacgcaacaacaacaaccaacttaacaataatttatgttaatag atcacgacttaaacacaataaatttgtcttcttacttctcgcaattggtaggtatcggccgcccgatgttcttctgggtt caacagaatattcgacacaaatcgacatgtggtaagaaagctaagagttaaggttttaagaaatatctaaagggatgtgc tttttgcatgaaaagcaggaaaagcaaacacagcaggaatttataatacagggtaaccgcagctgcagaaaactcgacaa ccaccacatcatagtagcaagtgggtttgttttgccaatcacaagacgcctacaatcaaaatagccaatcacagttcatt gcaagtgcggtgctggaaatgctatgcgcggcaggaaagcgcgcgtaaacaagtttcgttttcgcgcggtttcactggat gggagaactttcaacttcatcaaccttatcgcatgcttgtctgacgtttgttgtttcagttcttgcctctgattggccac agcgtgaggttttctagccaattgaaaagcacagtgttacaacaccaaggaagtctcaaaaatccatgagcaaaagtcta aaaggaaaagagttttagcccttgccataaacgtgaaactcaatgtataattttatttgctgtggtttcaggggcgtagg ttgtattttcttcgagatggcgactggccggcctttctttcctgggtcaacagttgaggatcaactgcatttgattttta aagtgagtatttatgtcgatgagcgcttttcattttttcctacgcaaagattgttttagtggttcgtccgcannnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgcttgcttcgctagttc gaacgccttgttcgctgtttgcttttcaaaggccgccttttaatgtttcaagagacagtttcacgaatatatgaagagtt ttggcaaaattggggccacaatccatctgtttactcacaaacttatttttggaaaactagcatgaaaagtagatcacaga actgaaaaagaaatcgtatattttgatgtagtccgagggaccaaattgaaaccttttagaggaactttttgcgagatgta acggagtgcagtcaagattcgttttgctctcaatgttgctattattgcatttatttatttatttttctgtgtttctagac attgggtaccccaacagaagaatcatggccgggcatcaccgctaacgaagtgtttgtttcaggtaaagatttgaaatcag tcgtatgaagatgcaaaaatgcccgtctccgcatttttccttttaatttttgtagggagatttcctcactattcaaggga acatcttgtaaatcacgcaccaaggtacgctattgttacgagttgtgtagtatttgtaaggaagggttactgtgcagggc ggaattcgaacaaaccaaatttagaaacaagcgcctttattaatgttattaacttgttcgtctgtttccttttaaggctt gataactctggactcaatttgcttgaaagatttgtagag |
|
Protein
| Protein ID | aug_v2a.19516.t1 |
|---|---|
| Definition | - |
>aug_v2a.19516.t1 LARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTQIDMWGVGCIFFEMATGRPFFPGSTVEDQLHLIFKTLGTPTEESW PGITANEVFVSGRFPHYSREHLVNHAPRLDNSGLNLLERFVE |
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