Gene
| Gene Model ID | aug_v2a.16818 |
|---|---|
| Locus | scaf8058 : 33091 ... 41425 : - |
| To GenomeBrowser | scaf8058:33091..41425 |
| Genes list of scaffold | scaf8058 |
Manual annotation
| Study field | Cell Cycle |
|---|---|
| Gene name | Adi-cdk13 |
| Description | Named thus because this protein shows similarity with Homo sapiens cyclin dependent kinase 13 by the BLASTP search. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin-dependent kinase 12 isoform x4 | GO:0006468 GO:0016772 GO:0044424 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.16818.t1 | gi|505803578|ref|XP_004608986.1| | PREDICTED: cyclin-dependent kinase 12 [Sorex araneus] | 0.0 |
| aug_v2a.16818.t1 | gi|685597944|ref|XP_009188762.1| | PREDICTED: cyclin-dependent kinase 12 isoform X4 [Papio anubis] | 0.0 |
| aug_v2a.16818.t1 | gi|701392923|ref|XP_009966963.1| | PREDICTED: LOW QUALITY PROTEIN: cyclin-dependent kinase 12, partial [Tyto alba] | 0.0 |
| aug_v2a.16818.t1 | gi|544499660|ref|XP_005584079.1| | PREDICTED: cyclin-dependent kinase 12 isoform X4 [Macaca fascicularis] | 0.0 |
| aug_v2a.16818.t1 | gi|635092725|ref|XP_008011059.1| | PREDICTED: cyclin-dependent kinase 12 isoform X4 [Chlorocebus sabaeus] | 0.0 |
Transcript
| Transcript ID | aug_v2a.16818.t1 |
|---|---|
| Definition | - |
>aug_v2a.16818.t1 tcaatgacgtgaaaatgtagggacatttcggccaaaaataatcgggatcaagatgcccagttcccgaaatgagaaggaat tgagtcttgccgctagaaatcatagcaaaagcaaaaagtcatcccataaaccaaagaaacataagaaacgtcccaaaccc gagacatcggctgaaaattttaggggacagtatgaagatatctcctcagcatcggatgaaactgcggagttgcctgttca aaaatacagctctatatcaccgagcccctcgcccgaagcgtcgaaaaacacagcacctaatgtaaagaggaagaagccaa aaaaggaaccttccatgcatcgatcaagtaaaagtaaaaaggacaagaaacggggcaagtcgcctatagatcttccacat cattcttaccaggctggtccaccattgtcgccagtttcgagttcaaaatggaaagatgtggcaccatcgccagagcctgt tctaagtagcgaggatatccatcaattttcgtcgcctgtgtcaaggaaacgtaggtcagagtctccttacctacctagag cttacagacccttaaaatcaccgagcataagcccctctaggtcaccgtacaacagacgaaggtctcccattagggacaga tcgccaatgaaagtttggtcaatgtcgccctatagccatagatcaagatcgcccacacctccaagagggaggtcaccagt aagaacttacaaatctttggaacagtccccttatcattctcctactggcaggttctcaccacatagccgcaacaaggcag catttagtcgtaggcagtcaccttcaccttatggacgacactcaccatcaccaacaataattaggaacactggcataagg agtaagccaactcaaaggaacagaccacgcagtagatctctgtcaccacatgagcaaaaatacgagaagtcaccagttac taggacaaaaaattggagtcgatcacctccaccaccttacagatcgcgaagaagtgcacctcgcagcccagagtttcata agtcaagatctgaaaccaaaagtacccctcggaaaagagaaaagtttccaagaaatgagccaaggattgctgaaacaaag tctgtgagcagagacttggctgtgaaattatccaactccaaggataatttaaataaaaataagaacaaggttgattctgt ggatggactgaaacgaaatcaaacaaagaatcctgaacattctgtgaaaaaagcaaacaagcaaggtgtagaaagcaata acaaagatttgttggcaaatggaccattaaagacttcaagttcaactgaagtgagaaagtcatccatagacaatgaaaag gtttgtcaaactgaatccaagccagctcttcctcttccccctttgaatgatccagtacctccacctctccctagtgagga gcctccaccattacctccagatgaagaaaagccacctccaccacctgcgccaactttaccacctctacctctgccacctg aattaccaggaacaccatgtgaatcaccaacatcatattcacctcactcacctgatggaaagcctccagactcaccaaaa tcagaccaacaattgcaagcttccaaggacacagacagaacaggtattccttctgtttctggtcaaagtagtcagagcgg cacaccattatctacaccagataccactcctagaactccagctgaaagtgagtggggcgagagatgtgtggatatgtttc aaattattgatcaagttggggaaggaacctatggacaagtatacaaagcaaaggacaagatcacaggtggggagttgtta ctgactatgttgttgtttttttggcttcatcagcctaaaagattgataattctttattggttttgttttgactgttggtt gctagtgttcgttttagattgaagcctagaaatatttctcactgttgacttcttgttcttattttatcaggagagcttgt agcattgaagaaggttaggactgataatgagaaagaaggctttcccataacagctgtgagggaaataaaaatccttcgcc aattgaatcatcccaacattgtcaacttgaaagagattgtaacggacaaaccaaatgccttggattttaggaaggataaa ggtcagtacaatataatttagggaatagatctattaccttggctttgagtttttaagctctgaaaattttcattttgggg ttggggggtggagggggcttttatttattcctttgtagaggaaaaaacagtcaagagttctttaaacagtcataaatcta gtgataatcatgaactctgtcatgtcagatttctaattaatagatgtgtcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn taaattatttaattttgtcaccatgagtttggatagtgtagtgcccattataaagatcaaaaggcagttgaaattgccac tcaatgcctacataaagattctattgatttgttagttgttctgttttataatgttattgtnnnnnnnnnnnnnnnnnnnn nnnnntattattatttttactaattatttttgttgatgtgaattgtggttgttgtttcttttaggggcgaaataaaactg gctgattttggattagcaagattgtacgaagcagacgagaggtatttttatggaaactttgattacatttttacaacaga atcacatgactgtgttagaaagtaacaagtttttttcttttttaaaatgtgtcaaaacttttctcatgatttccaggcga ccatacactaataaagtgatcacgctgtggtacagaccacctgaactgttgcttggagaagaacgttatggtcctggaat agacatatggagtgtggggttagtgtagaaaaatagatcattccagtatcttctagacaaatggcaaattttcacgtgca cagtagaagttgcaaaataattattgtacaatacttttcttaannnnnnnnnnnnnnnnnnnnnnnnnnnnnggttgcag cctagtggttgcctggtcacctggggtgccttatttgggagagtggttgaccaaatttctgaatgagtagcccaaatggg tgcctaccttatcacaaggtgattcatcctgttaatttgatcccagctggagattaaaatttaatgatgaaaaaaggatg tggttggggagaccggcagctaagcaaattcctcagataaaccactcatgtaaacacaaagggtttttgttgtatcatgt cctggtaacacatggagagtgggtcgcaatgtgattcctttgtatggaaaactgacatgatatattgctacattcataca gtcatttcctctgtttttattttacacatgtttaggcagttcaataatattaaccttgacaatgttcatgccataagctc ccaagagacataccagttacacatggtatgatattattcgtaatgtgatttcttaatcttaaattaaatgctgaaagaga atattactagtcttgttttggtaatgtctgcacgatggaatacacaaaaatttaagcatgtcacaagcgtgtaaaaataa acgattgctttttttcactttgtttatgaatacaacctttactctcaagatttattgccataaggcacattccagtgttt tggtaagtcatctgttgctggtttacgtcatccatataattacagttccgctgatttagatgggaaggggggggggggca tttaatttcaaattatttaaaggtgattttgtgacctttctggtgctagttggtgttgattttagttagctaccaaaatt agattgtcaaattttaaatttcaagttcttttaccatctcaggaactttcagtctacaaagaatgttcatctaaaatgga gtttacatctacccatgaggaatttatattttaaattttcccaaaatttctgtattaattaaacattttgatctcaagat gttaggcaaatatagcactatatcaaacacaagccaagcctgtaccacgttgttcttcagagcactattcacatctatga aatgcgtagctatatttttcttgttggcagacagctacagctaatgtaacgaaaaactttccaaggtaaccttgcaccct gttcaactgagcattggtactctacaaaacctgccatcttgttttgatactcataggttcaagagaataacaagcattcc ttgtcaatgcccattaaaaaaacgtgtcagcagtcacaaagacagtgtacccataagcatatgtcccctgagggacctat tttactagtaaatctcttgggcgctcatggcgtgaacatggttaaattcattggtttctttgacgcataactttccacaa gataactggtgcaaactgaactgcctttacgtgtgttaatcgctaagatggaggttgggtgcctgaagcatccaggagct tccactattggcagccagctcctcgatcaagactgctcccatggctggcaaatcctggcaacccagccatgagcccccac gcagcaagaggaacaggcacccatcacactgtagaaacagtggaaagagggagggaaagggggtgggaggaaaactactt gggcaataagctgccacagtaaaccaggggaacgcctcctgcacgtttgggcatttcatcaaataatttgaaggaaaaca cttttgctcttggtcaaaaaatatgtttaattattaatcttcatgaaaaactgggaatttagaaggaagtgtggataatt gagaaatcctgagaattgaggcccaaataatcagggttcaactgcaataaataaaaaataatagtgtaatagagaaagat accctctttttatttaccagatgcattcttggagaattgtttaccaagaaacctatttttcctgcagtccaagaaatagg ccaactagagcttatcaggtaaggaagaaagttcaagtggaaaagctagtaaattatttcaatcattttgagtcatagaa ggttgaactttgttaccagcatacatgcaagtttttttttgtttgcagtcgtatttgtggtactcccatgcctgctgtat ggcctgatgtgatccacttacctcactttcacactattaaaccaaagaaacagtacaggagaagggtaaaagaagagttt tcattgtaagtgcctctttttgatttgtataaaagtagttacacaagtttttaggctaattattattccatgtacaggtg tattcaacacaatttgatactgaaacgttgtgtattttgattaaagctctgtcctcttcacagtatgccagcagatgctt tggatctgttcgatcgcatgctgaccttagatccctcaaaacgcatcactgcagaagaatcactgcaacatccatttctg aaagatgttgtttgtcagaatatcagccctccaaggtaagaaatcacgtcaagtttgcacacagcccactagagatgact gggagcagcattatgatatttttatgataacttgttatcctagctaatggtggttttgaagacaggtgttcccaataata taatttattaggcattcttcaagtaaaagagctttttctgtaagtgacaagtgttttcctattgcccatttaagagataa cttctctgaagagtcattgatcactgctctcacatgctttctttagcttaccaacatggcaggattgtcatgagatgtgg tgcaaaaagaggaggcgcaaaggggaaggaaaagccgctgacgatggaagctcaggaaagcagggtaggcgagagtcagt ggctgacaatttggaaccttcaatcgaccaccctactcagatcccaaaagaggaccaagatgagactaactctttcccgc gcagacaaagcattgaaactattgagatggaaactgaagatgtgccagaaaatgcccattccataagagatgagctttcc ttcagtgatgaaaaactgccagaacaatattcgtacacagaagagcacccaaaggcagcttattcacaagattcgtatta tcaacgtgactatcaacaagattatagtgaaggttctagaaacagtatattcaggactgatgagggctatccacgtcctt atgcgagggaaaattttgacaatagcagagcaagtagatattcccagtcaagtgtgcactatgaacaactgtctccaccc attgatcatactacaagatcatacactgatcagtataaacattatgagtatgacagtggtagaagagagaaagattatga tgagtcctcttcacgttacagggagcaatcagcttcatacctttacagagaacgttattcagattctttttctcagaagc gggaaatttttgattacagcgattcacaatacagtcattatccagtgggagctgaaaaagtaaatagccctgtccgtggt gtggagacttgctcaaggtggtagtagatgttatccattgaaatccttgagttggtaaataacaggtttcatttttccct tttttttttaccttgagaggataaaataattttgtcctctcaattgtcttttggcaagggaaaaaaagaaatctctcctt cactcttactaggaaacattttctctcattaaaagagttttatttcctccaaagtgtgaaagtcagaaatgtgcatcagt tcctcttattctttcatttagcagaatgtgaaaatatttgcaataatgcttccttttaagcaggctctccgttaattttt ctgtgctggaagtaaacgtgtccaagacttgtagtagtctccttgcatacttccatgcaactgctactctcagttcaaca ctaatgagttgtaaatagataattttatttttgattggcaggtcagaatgatcttgtcaaattcaatgtttttctaccca ctataaagcttgttttaccacgagaaacattttggagaaggcatggtgttaataggcagtaattcctgaggattgtaatg aagccatgcaagtcttcagctagactaatccttttttagaaaaatataaaacatggttttgagagccctgtgtattgcta ttatctactttagcacagcaacccttaatcacccatggcttgtgatagaatgggtgtcagaaatacaaggtttaaagggg aaaaaagaaccaggtctagtccagagagcatttctccttgaaaattaaactttttctgctcactgaaatgcagttctctc atcttaatttgtacgaagtgttcaatgaacaaagacaccatacttcccttcagacttggcaagcagctgaatgagaataa aattgatgtaattgt |
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Protein
| Protein ID | aug_v2a.16818.t1 |
|---|---|
| Definition | - |
>aug_v2a.16818.t1 MPSSRNEKELSLAARNHSKSKKSSHKPKKHKKRPKPETSAENFRGQYEDISSASDETAELPVQKYSSISPSPSPEASKNT APNVKRKKPKKEPSMHRSSKSKKDKKRGKSPIDLPHHSYQAGPPLSPVSSSKWKDVAPSPEPVLSSEDIHQFSSPVSRKR RSESPYLPRAYRPLKSPSISPSRSPYNRRRSPIRDRSPMKVWSMSPYSHRSRSPTPPRGRSPVRTYKSLEQSPYHSPTGR FSPHSRNKAAFSRRQSPSPYGRHSPSPTIIRNTGIRSKPTQRNRPRSRSLSPHEQKYEKSPVTRTKNWSRSPPPPYRSRR SAPRSPEFHKSRSETKSTPRKREKFPRNEPRIAETKSVSRDLAVKLSNSKDNLNKNKNKVDSVDGLKRNQTKNPEHSVKK ANKQGVESNNKDLLANGPLKTSSSTEVRKSSIDNEKVCQTESKPALPLPPLNDPVPPPLPSEEPPPLPPDEEKPPPPPAP TLPPLPLPPELPGTPCESPTSYSPHSPDGKPPDSPKSDQQLQASKDTDRTGIPSVSGQSSQSGTPLSTPDTTPRTPAESE WGERCVDMFQIIDQVGEGTYGQVYKAKDKITGELVALKKVRTDNEKEGFPITAVREIKILRQLNHPNIVNLKEIVTDKPN ALDFRKDKGQGEIKLADFGLARLYEADERRPYTNKVITLWYRPPELLLGEERYGPGIDIWSVGCILGELFTKKPIFPAVQ EIGQLELISRICGTPMPAVWPDVIHLPHFHTIKPKKQYRRRVKEEFSFMPADALDLFDRMLTLDPSKRITAEESLQHPFL KDVVCQNISPPSLPTWQDCHEMWCKKRRRKGEGKAADDGSSGKQGRRESVADNLEPSIDHPTQIPKEDQDETNSFPRRQS IETIEMETEDVPENAHSIRDELSFSDEKLPEQYSYTEEHPKAAYSQDSYYQRDYQQDYSEGSRNSIFRTDEGYPRPYARE NFDNSRASRYSQSSVHYEQLSPPIDHTTRSYTDQYKHYEYDSGRREKDYDESSSRYREQSASYLYRERYSDSFSQKREIF DYSDSQYSHYPVGAEKVNSPVRGVETCSRW* |
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