Gene
| Gene Model ID | aug_v2a.16157 |
|---|---|
| Locus | scaf7380 : 7676 ... 9400 : + |
| To GenomeBrowser | scaf7380:7676..9400 |
| Genes list of scaffold | scaf7380 |
Manual annotation
| Study field | Cell Cycle |
|---|---|
| Gene name | Adi-cdk9 |
| Description | Named thus because this protein shows similarity with Homo sapiens cyclin dependent kinase 9 by the BLASTP search. |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin-dependent kinase partial | GO:0004674 GO:0005524 GO:0006468 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.16157.t1 | gi|156365870|ref|XP_001626865.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.16157.t1 | gi|677707822|ref|XP_009082033.1| | PREDICTED: cyclin-dependent kinase 9 [Acanthisitta chloris] | 0.0 |
| aug_v2a.16157.t1 | gi|706151615|ref|XP_010207040.1| | PREDICTED: cyclin-dependent kinase 9, partial [Colius striatus] | 0.0 |
| aug_v2a.16157.t1 | gi|704542596|ref|XP_010177165.1| | PREDICTED: cyclin-dependent kinase 9 isoform X2 [Mesitornis unicolor] | 0.0 |
| aug_v2a.16157.t1 | gi|675403509|ref|XP_008918547.1| | PREDICTED: cyclin-dependent kinase 9 [Manacus vitellinus] | 0.0 |
Transcript
| Transcript ID | aug_v2a.16157.t1 |
|---|---|
| Definition | - |
>aug_v2a.16157.t1 atcaaagagtagaatttgccaccaagttgaacgactgagtgagtgacattatgtttcatttgttttgcttgacagcctca ccttataatcgcaacaaaggaagtatctaccttgtgtttgagttttgtgaacatgacctagctggtttgctgagcaacca tcagatcaagttccaagtgtcagagatgaagaagctgattcagatgttgctgaatgcgctgtacttcattcacagtaaca agattcttcatcgggacatgaaggctgcaaatgttctcatcacaaagaatggtgttctaaaattagctgattttgggttg gctcgcgctgtccatgttaacaaagagcaattgcaacgttacacaaacagagttgtcacactctggtacaggccaccaga actcctgcttggggagagaaactatggccctcctattgatctatggggtgcaggttgcatcatggcagaactgtggacac gaactcccatcatgcagggaaattctgaacaacatcagttaactctcattagtcatctttgtggttcaataacatctgag gtttggccagcagtggaaaaactggatttgtttaacaaaatggtccttgcaactaatcagaaacgacgtgtgaaagaaag gctgcgcagctacgtcaatgacaaccttgcgctggatttgattgaccaaatgttaaccattgatccaagccacagaattg atgcggacactgccttgaatcacgacttcttttggagtgacccattgccaagtgacctaacacggacacttagttctgtt aataagtcaatgtttgagtttctggcaccgccgcatggccgacgaggtcaggtgcaagcaactactgcagctgcggcaca ggcacgcagcagtactgccagtcaatcaagtgttgttcagagtgggacatttgaccgagtcttttaagttgaaattatgt caattggcagttacatgcacagctgtttctgcacagtcgtagggaattttccaataaggataatgttaatatttattgtt aaaattacaaggcatttattaatctcatgaagctannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnntgaacataccattaaaaaaaaaactctaaaagtttagtgtaagaaatacaaaa aaaagcataaatatgaaggtcacgcgagtttaagctcaatattgcgctttgtgtttcttgcattacgttaatagaatgtt tgagagctttattgctgatggtttttaccacagagaacacattttgtagtactgaaataagatgtcgctgaaatgacatc cgtggataagtaattttcgtcaagacaaaaatgctgtgcacttcaaacattgaattacaagatggcatcaacgcctagtc atttctgagggcagtggttttgccagtgatgttaccacttaccgacaaacaagagaaacacaaccagtaatatattatta ttggtttcactgggtaatacaatcttgaggtttatttttctatttttttttaaagactgtccaactgccatagtaataat tttcgaaagcagagaacaagacaagaagttggcttcatttgaagcccttcaggcatctctgtcgtacttgctgcactttc ttagatgttgtcactttttacaacattagatttgaaaaagatcct |
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Protein
| Protein ID | aug_v2a.16157.t1 |
|---|---|
| Definition | - |
>aug_v2a.16157.t1 MFHLFCLTASPYNRNKGSIYLVFEFCEHDLAGLLSNHQIKFQVSEMKKLIQMLLNALYFIHSNKILHRDMKAANVLITKN GVLKLADFGLARAVHVNKEQLQRYTNRVVTLWYRPPELLLGERNYGPPIDLWGAGCIMAELWTRTPIMQGNSEQHQLTLI SHLCGSITSEVWPAVEKLDLFNKMVLATNQKRRVKERLRSYVNDNLALDLIDQMLTIDPSHRIDADTALNHDFFWSDPLP SDLTRTLSSVNKSMFEFLAPPHGRRGQVQATTAAAAQARSSTASQSSVVQSGTFDRVF* |
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