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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaug_v2a.11535
Locus scaf4501 : 59016 ... 60848 : +
To GenomeBrowser scaf4501:59016..60848
Genes list of scaffold scaf4501

Manual annotation
Study fieldPhotoreceptors / Circadian
Gene nameAdi-sgg/zw3

Annotation by Blast2GO
Annotation GO
glycogen synthase kinase-3 beta isoform x2 GO:0000320 GO:0001085 GO:0001837 GO:0001954 GO:0002039 GO:0004674 GO:0005178 GO:0005524 GO:0005654 GO:0005813 GO:0005829 GO:0005886 GO:0005977 GO:0006349 GO:0006983 GO:0007520 GO:0007623 GO:0008013 GO:0009887 GO:0010226 GO:0010614 GO:0010800 GO:0014043 GO:0016477 GO:0021766 GO:0030010 GO:0030426 GO:0030529 GO:0030877 GO:0031333 GO:0031334 GO:0031625 GO:0032091 GO:0032092 GO:0032436 GO:0032886 GO:0033138 GO:0034236 GO:0035255 GO:0035372 GO:0036016 GO:0042493 GO:0043025 GO:0043066 GO:0043197 GO:0043198 GO:0043407 GO:0044027 GO:0044337 GO:0045121 GO:0045444 GO:0045773 GO:0045944 GO:0046777 GO:0046827 GO:0048156 GO:0048168 GO:0048471 GO:0050321 GO:0050774 GO:0051059 GO:0051534 GO:0071109 GO:0071260 GO:0097192 GO:0097481 GO:1901030 GO:2000738

Blast Hit to nr / sp
query Subject ID Subject Name evalue
aug_v2a.11535.t1 gi|156370351|ref|XP_001628434.1| predicted protein [Nematostella vectensis] 0.0
aug_v2a.11535.t1 gi|296491389|tpg|DAA33452.1| TPA: glycogen synthase kinase-3 beta [Bos taurus] 0.0
aug_v2a.11535.t1 gi|296491466|tpg|DAA33519.1| TPA: glycogen synthase kinase-3 beta [Bos taurus] 0.0
aug_v2a.11535.t1 gi|259013508|ref|NP_001158498.1| glycogen synthase kinase 3 beta [Saccoglossus kowalevskii] 0.0
aug_v2a.11535.t1 gi|585671838|ref|XP_006818120.1| PREDICTED: glycogen synthase kinase 3 beta isoform X1 [Saccoglossus kowalevskii] 0.0

Transcript
Transcript IDaug_v2a.11535.t1
Definition-
>aug_v2a.11535.t1
gcctcgacacaacttcggattgtttcgtcaccgttgccattggctaacaaacttcgctgggggccccctaacagcacatg
cctgcagtttcaagcgccattgtgattttgcgagtgtcatttgcctttggttgggtttccatagcgtgaaaaaagacctt
tatcgttcttgtaagagattgatcggtggataggcattccgtataggaacatcccaaataaacggtattggttttgtcct
tcaatgagaggaaaagtgtgcagtttaaggaccattaagaaaaatcacttgtcggtgtaagattgtttgaaagcaactct
ccatgttgaatgtaagctgacgacggaaatgtaatggttcggtgatcctttgggctcatctaaatcgaagattttacaat
catgagtggacatagaccaagaacaacatcgtttgctgaaacaaataagtctcacccgccgtcttttggaggagtaaaaa
taagtcgtgagtatatggaccttatccatttcataagctgcagtagctaatttgaaacgttgttttagatcagaaaaaac
ccacatcaatgatgaagaaatttcaaataccttaagcggaatcacaaacgaattaactgttgatttttttaggggataaa
gatggaagtaaactcacaacagtggtagcaactacaggttctcttcctgatcggacgcaggagatcagttatactgacac
gaaagttattgggaatgggtcattcggagtggtgtatcaagctaggatgtgtgagtcctctgagcttgtagctatcaaga
aagtattgcaagacaaaagatttaaggtaatataatttccatgtccatttttcagaccactgaaaacgcttcctgggata
aataaaatttctgagggtaataacgcatcacgaggcttcataaaatgccgaaacaatttctaccattgatggcaacatta
tcttgtttatttcagaatcgtgaactccaaatcatgagaaaactagaccactgtaatattgtcaggttgcgatggttctt
ctactccagtggcgaaaaggtaagtatcgattttgatattgataaacgtagtttcacgtttttgtatcattgcgtgaagt
gcatcgaaaggctttctccttgttgcttctactgtgtccaagttgcgccctgcgattcctggttaacacagatcgtaaat
tgaactgtcttggtggttgtacagacattaattgccgcaattcactaaatctacggcattctgttcataatagtttaaaa
aaccaacttcccgcattgttatgcgaaaggcacgaaaacaagattgaacgaagcgtcgcttgaaatatatttctcaaata
taatgtcgttgtcttaaagtgaaaatcatattctctcacgtgggtaataaggcctgcaacatatttgataaaaatacgag
taccctatcgttattcatgcgttcttcacatcatctcggagatattcctttttacttctattttcacgattaaactgtta
cctgtgagtgatgtggcgtctgcctttaaattaaagacgtaagatgtttttgtacattttggagacttgcatgggtgctg
ggtgatcttaggttggtacttctgaacattctattgcattgtatatccagtggccgtcatattgattattgtactaaagc
ttttttgcatgaaatttcctttgcattgttgcagcttgctaacaaaataaatttaacacaaaaattgctatttttttgtc
attcagtttttttttatttaccagccgttaagttgagttttgaaagaaaatatattaaactggaggtttttgc

Protein
Protein IDaug_v2a.11535.t1
Definition-
>aug_v2a.11535.t1
MSGHRPRTTSFAETNKSHPPSFGGVKISRDKDGSKLTTVVATTGSLPDRTQEISYTDTKVIGNGSFGVVYQARMCESSEL
VAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRWFFYSSGEKPLS*

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