aug_v2a.11253: Genome browser

Gene

Gene Model ID	aug_v2a.11253
Locus	scaf4353 : 13596 ... 15145 : +
To GenomeBrowser	scaf4353:13596..15145
Genes list of scaffold	scaf4353

Manual annotation

Study field	Autophagy
Gene name	vps15-7

Study field	IP3 pathway
Gene name	Adi-PIK3R4-6
Description	Named thus because a bi-directional best hit result was obtained by BLASTP searches. See Homo sapiens phosphoinositide 3-kinase regulatory subunit 4 gene.
mRNA evidence

Annotation by Blast2GO

Annotation	GO
pik3r4 protein	GO:0004674 GO:0005524 GO:0005643 GO:0005770 GO:0005930 GO:0006468 GO:0006623 GO:0016236 GO:0030242 GO:0034271 GO:0034272 GO:0045324 GO:0071561

Transcript

Transcript ID	aug_v2a.11253.t1
Definition	-
>aug_v2a.11253.t1 gtaactgttcttttgcttgacagggatcatctttccagagcagttttacacttttcttaacaagtacatgagcaactttg ccatgcagtctccagtacttactgctgatgaaaaggtaaccaggtaattgtgaattgtcaaagagagcttcaggtctgaa agaataataaacattattacgaacaaacttacttatgcattattcaattttgccatgattcaagacgatttgtacatgtg atgattattgtcatttcattgcattagccagtgatgattattaagcatgcagaaactttaaattcattttgttccaatat gattttctagctgtattggaatcaaacgtgatattgacctgattttgaaagagctacttccaacaaatgatgttcatgat atttctgttaatgatagagctggtaaaaatttctgattgttgcattttcctaacagtcattcaaacttgttaataatttt gtgatttacataatcattggtttcttaatcttattttataggctgcttggtgattattgtttctcttctgacatcctgca ttagaagttgtattaaggtatcagtagtctgcatactgtgtttgaatgtcctgtgtgggatttaaaccaagttgccacac atagaattattgctttattttagggaaatgaggagtactggggagagtgcaaaaacaactgacaggggatgggcctggga cagaaccttagatttcagtatttcagtcttacctttgtgcgcactgacattgaaaaggtgaaaatgcaaaattgtggcaa agttgtcagtgcatgcctttcagcaaaatgcaattattatcaatccaatttcagctagtggatgatattcaaattttaat ttgtatttattgaatcaaaaacattcttcagaagtgttcaaaagtaacacaaatatcaacatagcgttcataatttatat tgataaagtaataattattgtagttcataacatcttaatttctgagtttttgcatttatgggctagaagttattgacgaa tgcgctcatcttttctttgcagtactgtgtgtccaaactgacagtattggaactgtttttgaagattgctcgacatgtca gtgatgaaatcattttggagcgtttgttaccttacatgctgtttcttgtcaacgattctttacctcaagtcagagctcag gctctgaagattttaagtcattgtctacagctggtgtgcagtgtggccagtagcgatgccaacatatttccagagtatgt cttgccaagtttatcatggctcactcaagatcaggaggtcattatgagaattgcatatgctgagaatattgcatcactgg cagaaagggctttgaaatttctggaaatggcgcagttagattatgccaatcaagagaacaaagaagatgaggacttgcct attcagcaccaggnnnnnnnnnnnnnnnnnnnnngggactgtttgtgggtgaattgtgtctttctatgttgaacttaaag ggcaagtattaataattattgtttattaat

Transcript ID

aug_v2a.11253.t1

Definition

>aug_v2a.11253.t1
gtaactgttcttttgcttgacagggatcatctttccagagcagttttacacttttcttaacaagtacatgagcaactttg
ccatgcagtctccagtacttactgctgatgaaaaggtaaccaggtaattgtgaattgtcaaagagagcttcaggtctgaa
agaataataaacattattacgaacaaacttacttatgcattattcaattttgccatgattcaagacgatttgtacatgtg
atgattattgtcatttcattgcattagccagtgatgattattaagcatgcagaaactttaaattcattttgttccaatat
gattttctagctgtattggaatcaaacgtgatattgacctgattttgaaagagctacttccaacaaatgatgttcatgat
atttctgttaatgatagagctggtaaaaatttctgattgttgcattttcctaacagtcattcaaacttgttaataatttt
gtgatttacataatcattggtttcttaatcttattttataggctgcttggtgattattgtttctcttctgacatcctgca
ttagaagttgtattaaggtatcagtagtctgcatactgtgtttgaatgtcctgtgtgggatttaaaccaagttgccacac
atagaattattgctttattttagggaaatgaggagtactggggagagtgcaaaaacaactgacaggggatgggcctggga
cagaaccttagatttcagtatttcagtcttacctttgtgcgcactgacattgaaaaggtgaaaatgcaaaattgtggcaa
agttgtcagtgcatgcctttcagcaaaatgcaattattatcaatccaatttcagctagtggatgatattcaaattttaat
ttgtatttattgaatcaaaaacattcttcagaagtgttcaaaagtaacacaaatatcaacatagcgttcataatttatat
tgataaagtaataattattgtagttcataacatcttaatttctgagtttttgcatttatgggctagaagttattgacgaa
tgcgctcatcttttctttgcagtactgtgtgtccaaactgacagtattggaactgtttttgaagattgctcgacatgtca
gtgatgaaatcattttggagcgtttgttaccttacatgctgtttcttgtcaacgattctttacctcaagtcagagctcag
gctctgaagattttaagtcattgtctacagctggtgtgcagtgtggccagtagcgatgccaacatatttccagagtatgt
cttgccaagtttatcatggctcactcaagatcaggaggtcattatgagaattgcatatgctgagaatattgcatcactgg
cagaaagggctttgaaatttctggaaatggcgcagttagattatgccaatcaagagaacaaagaagatgaggacttgcct
attcagcaccaggnnnnnnnnnnnnnnnnnnnnngggactgtttgtgggtgaattgtgtctttctatgttgaacttaaag
ggcaagtattaataattattgtttattaat

Protein

Protein ID	aug_v2a.11253.t1
Definition	-
>aug_v2a.11253.t1 MLFLVNDSLPQVRAQALKILSHCLQLVCSVASSDANIFPEYVLPSLSWLTQDQEVIMRIAYAENIASLAERALKFLEMAQ LDYANQENKEDEDLPIQHQXXXXXXXXDCLWVNCVFLC*

Genome browser

OIST Marine Genomics Unit since 2008