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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaug_v2a.11252
Locus scaf4353 : 8556 ... 12390 : +
To GenomeBrowser scaf4353:8556..12390
Genes list of scaffold scaf4353

Manual annotation
Study fieldAutophagy
Gene namevps15-6

Study fieldIP3 pathway
Gene nameAdi-PIK3R4-6
DescriptionNamed thus because a bi-directional best hit result was obtained by BLASTP searches. See Homo sapiens phosphoinositide 3-kinase regulatory subunit 4 gene.
mRNA evidence

Annotation by Blast2GO
Annotation GO
loc779618 protein GO:0005930 GO:0016772 GO:0043227 GO:0044237 GO:0044699

Blast Hit to nr / sp
query Subject ID Subject Name evalue
aug_v2a.11252.t1 gi|21634428|gb|AAM63406.1| adaptor protein p150 [Xenopus laevis] 3.0e-23
aug_v2a.11252.t1 gi|111306263|gb|AAI21685.1| LOC779618 protein [Xenopus (Silurana) tropicalis] 9.0e-23
aug_v2a.11252.t1 gi|166795993|ref|NP_001107701.1| phosphoinositide 3-kinase regulatory subunit 4 [Xenopus (Silurana) tropicalis] 1.0e-22
aug_v2a.11252.t1 gi|410904663|ref|XP_003965811.1| 2.0e-22

Transcript
Transcript IDaug_v2a.11252.t1
Definition- 
>aug_v2a.11252.t1
acagagattagcgtttgtgatgattggtggtcgaccggtcacttttacacatgggaaatcagctgtcgggaatcgctcct
tctcagattttgagtgtggagcattactttagtgacctttcagactttgagttcgattgcaggtaacttaagtttacctt
cctttggcgcaaggacgctcaataactgtgtgttggtttttcattgtaatattaattttcttcataactgagtattttgt
tgcattactatcaactcgtttttctaatcgcttctagttttgttctcaaaatcggagtattttaatggttttgtccacaa
aacgggacaggggaagagttcactgtattgacagataaataaatgtccacaaaataagatcttaaacaactagggacagg
tgtttaaatggctacctattagctgaggggggttataccctacattgaactaccatcctgtacagaagataaaatttggc
taattttgttgaagattgattgttactgtttctttcatagcttgggaagcacacggtttcttaaagttgctcttgcaaaa
tataggtaagttgaaattgctttataaaaaagttccacgcgtggttagtatgatttttaacttgctccttccagattttt
aggttatagcctttaacatgtttggtattgtaagattgcttgagcgactaaggcacagcttaagcaagatgagcttaagc
aagatgataataagattgctgaatggaattggaataaaatattgttgttggatggattgatcctgaaagtgaattaattt
gaagttgcatgtatttagcaatcttgaacattaaatctcaaaatattcttgaatggaatagatgtaaatgtgaatacatg
tatacaaagttcctgaattttgcaacatttcactggcgactatggatgtgggtggagtttctctgttccctactctgctc
tgagagttttttctgtagtataatttatggtattgtagtccaggtatctttgaactcatttaaaaccaactgttgattta
attcgatataccagtattaaatacgattagtagtcatcatgtgccaagaatannnnnnnnnnnnnnnnnnnnnnnnnnng
cctgccatctccatcattatcattatcatcattgatgtggaaaagtcaagtcttgtaacattgtttcatgattatttaca
cacaagacattctaactttgatgtatctgttttaaataattatctttttatagagaagggctctgtgtcgtgtcaaaagg
tctttgcaattcaagatccatcccttccgctggagacataccaagatcaactcagcaagatcaagaacaggcttgctggt
gcttcaaatgttcttccttttcatctctcaattataacagacaaagccagcctcttgatcagacaattaattttgtcaaa
gacaatttatatgataggataaggtgagtttctgatacaagagggcccagaatcctaggataaaagtgttgtagaaaatg
ttaatgcacgcatctcataccaagacattttattgaaatgcagtactcattatcnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnntaaaagtgaggaggtaaatgtggttattgcaatgttcccttgattcagccatctcctgtatgtgttaaacaagca
acctatgattttttatttaataagtagcagtaataatcatctcctccaaagtagtccagaatagttagcccaaaacttag
tttggagttaaggcaatttgaaggctgccctattagtttttaagctgccccttttgatgcttgagtgtatggccaatgag
ttctgttagttggagagaatgagatatatattgatctggggtttaaattgttttagtatcacccaactagtggactaatg
caaatcctgcattttgattggctacgctactataggtctattagtaatagtcatcgagtagtgaagttcgcgggttttgt
aaacctatttatttcgttttattcccaaagaaatatttttttttgtgctgaatttatcattgcttttttctgtccgacta
gttgggtgatactataacaattagacccttcgccctcaagggccatggatcaatagcccattcggcttcgcctcaggggc
tattgccccgtagcccttttgggctacgggtctaattgttaaatagtacagtgtcttacatttagcttctacatgaaggg
aaagggaacaaaccactcctttcactttctttgccctactaaagcaggtttcttgtatgcagggtgcatgatactcacaa
ctcttgtgtcagagccaaatctgaagaataaagtacattaaagtgcaatctgtgtagtaataacaatgtttttgtccggt
gacaggtctgtcatggagacataaaaactgaaaatgtgatgctgacaggttggaactgggtctttctgacagacattaca
tacttcaagcctgctatatttccggaggataaccctgcagacttcggcttgttctttgacagatctcgacattgcagctg
ttaaattgcaccagaaaggttttggattccagacaggcggatcagatgttctcaataggagttttatcagctgttgatcc
acagccaaagagcagagatcacagcttcccagatatggattttgtgaggcatcaatggggaaatctgactccagagacgg
atatattttctgctgggtaagacagaatcagtcaagtttcttaaggcctgtcttgaataattttttgaaaatttaacact
caaaattctctgtttcctagctatgtcatcgcagattaaagagggcaacaggctgtttggtannnnnnnnnnnnn

Protein
Protein IDaug_v2a.11252.t1
Definition- 
>aug_v2a.11252.t1
MGNQLSGIAPSQILSVEHYFSDLSDFEFDCSLGSTRFLKVALAKYREGLCVVSKGLCNSRSIPSAGDIPRSTQQDQEQAC
WCFKCSSFSSLNYNRQSQPLDQTINFVKDNLYDRIRKVLDSRQADQMFSIGVLSAVDPQPKSRDHSFPDMDFVRHQWGNL
TPETDIFSAGYVIAD*

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