Gene
| Gene Model ID | aug_v2a.10551 |
|---|---|
| Locus | scaf4036 : 49271 ... 60035 : - |
| To GenomeBrowser | scaf4036:49271..60035 |
| Genes list of scaffold | scaf4036 |
Manual annotation
| Study field | Autophagy |
|---|---|
| Gene name | AMRA |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.10551.t1 | gi|156382073|ref|XP_001632379.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.10551.t1 | gi|156340147|ref|XP_001620367.1| | hypothetical protein NEMVEDRAFT_v1g223189 [Nematostella vectensis] | 0.0 |
| aug_v2a.10551.t1 | gi|676473995|ref|XP_009060001.1| | hypothetical protein LOTGIDRAFT_228915 [Lottia gigantea] | 2.0e-16 |
| aug_v2a.10551.t1 | gi|585662789|ref|XP_006816812.1| | PREDICTED: activating molecule in BECN1-regulated autophagy protein 1-like [Saccoglossus kowalevskii] | 3.0e-16 |
| aug_v2a.10551.t1 | gi|260827092|ref|XP_002608499.1| | hypothetical protein BRAFLDRAFT_126632 [Branchiostoma floridae] | 6.0e-15 |
Transcript
| Transcript ID | aug_v2a.10551.t1 |
|---|---|
| Definition | - |
>aug_v2a.10551.t1 catatatcgctaaagcatttcttatgacggtgtcctctatgtttggatcattgaccatcaaaagatgggaaattataccg ttgatggcgaagtacaaacatcagaaaaagtcttctgtgcgaaatgaggtttgagaaacttactggctttcaaaaaattc atctcaacaaatcagacataacaccggcttcttcattcgaagatcgtctttgttgtcttgtacgtgggtggtgaagcgaa ggcttttttctttgtaacaacaattgcagttgcgtttttattgctgcgtttgaaagtgggatccaaactaaagaagctcc tctcatttctgaaacttctgtggctgtgacgagggaagaaccgaatttggctccggtttgaacacaggaagtaaggaatt cgaagtgataatgacgcagacgagaagaggagaatcgaacatttttcgggctttgatgagacgtgaaataaattgtcgag gccctgatgaccgtaatttgttgctttcttatgcggaagactcaactataatgtcctgtgagcaagggaaggtacgtgta aatgtgttttcatttttcgcttagaggcgacgtccaatgtcgtaagtgcattgtgttactaattattttgaagtcgacgc catggccaatatctattcaggattgtgtgactgagtttgtaaatggttttactgtatatcagttaattgccatgccttat tcatggttcttttgttctaggaatgtaattcgcgtcgctaacgcatcttgcatttcaaataaaattcgcaaaatatactg cagttgagttcttctccatgtcattttccttgaaggcataagttaccgtagcaatatatctcgactccataagatgtgtt gacaaattaatgtaatatataaaaccatctagatttatttgtctttttttgtttctttttgggtcctacgtcatttctca agtttgcttgaataatttctttaagatcgttcctttttttacgtttgacagggagcttttgttttaatatttttcgacac acgctgttttggggtatttttatgataattttattcgctacagccagttattggaacgatgaaagtcatatgatgcctcg aaaatttgcctctgtgtttttgtttggttttaacgcccaaattcagccttacatgaacccaaggccacagatctagaagt gtcgactgattacttttccgtgggacgatttggcagctcatttgcaccacttagaatttctgtaagattcatttgtccga ccagaaacaatgaagtcaaattgccaagagtatacttgaaattcaacagatgcatgttgcttgaccttggcacatttata attgcacatgcaattgttaatagttgtcagatgtttgattttagaacttaccagtatcaataattgcgagaatagtgcca gatagattgttttaatcgaaggtaatgaattctctgaaattaccacttaccttagccaacttattaatatgctcaagaag tgtctagtccaaggagaaactgccatgagttgtttcttaaacaatcaaacaggaaagagctgccagacaaacttatcaaa atttaccaaaataatttattatatccattgtctccagcggtcccaagcactgcaagggaaatcctgctgattcaagtgtc ttatgtttgaacattttttactactactacttcacggttctttagtcattaggaactcaaataatttgtctttatgaaaa aatctaaatgtatttcttaaccttgccttacaggagtcttgtctcagccattaaaattaaattttcatgtcgtgtttttc tgctgacagggtttaatgttttttgttttgatttgggctgatgtgttgggtttaagatttaattttttttgtgcatttgt attcagttatcatgtacactgtgaccttaataatttgtcttttcagccctacaaactcagcagagnnnnnnnnnnnnnnn nnnnnnnnnnnnnngttgttgatgaacattttctcttgctattttagaaatgatttttgaagaaatatttaagtcattac aaacatgtagtaaaaaatttcaaagacaggcagaagagcactacacagtatcccctttgttcttttattattttacagtg tattaagcactagtcaaaacacagttttagttccctccagaaagttattagtgtaattcagcttttgaatactctatcac tctattttatcattggcacatgcaattgacgcacaatcactgtctacaaagttgccatactgtgtatatctttttgtttt gaagtattcttaaatattaatcttgtagccaaatgcggtaacaaggaaataattcaaacaatcttcagccacgacacctt agtggctcttgtgcaacttttacctgaacagtaatattaaaaatttggaagatgcatgttatgctaacagcaactgttta ttcaagtgacttcatagataatatcttgcttgtcatagtaaacatccctttgtacttgtctgctactaattttgtgtcat gataatgtaatccattccactgtttcatgcattcttccctaatttagataactttcattcaataatgcagtatacatata tgatattttgggggcatatgaagaaaactacagtaattattattgatataaagtgttcccaaagcttgaatattaaagca agctgaaatcgaatgcgatatcaatttgtttttgtcaaagttatatttagctctgtgtcttaaataaggattgttatttt ttacatctgtagggggtatggcacttttgttgtgatgatgtcattgttaattagataaatatgtaccctgaagcttcaaa ataatgatattcatctattcattcttttaatcacactatacagaaaatttacacacaacttagaatataaatgcaagaga aaaaggaatagtattaagccattgtgtaatcaataattcgtagtaggtgtgcagtgagtgtccataggaacaggggtttc cagttggacacaaccatagctaagaagatggtagcatggatgtagatcaactgaactattaatgtaattcagaagcaaca aaagtaaagtaaagagaaagaaaaagagaaaaaactttattcctctaggtttggagcagcaacaagccagtgttaaattt tcaaaattttcaagtttgattaatcaaaggatgatgtttccattcttttgaaaggaaccaatagttagacacttagttac aaggtcataatataagaaataagttgaagtaccagtctgtctttttgagggaaatgtattttcctgcctgattttgttgc aaaacttgttaaaatcctgacaactatgttttggcaaatgcaaaagataaaagaactttatgcttgaatatgttttcctt ttaatgaactgattgtcatggtgatataattcacttttataattaccagccatgcttaatatcaaagcctgtaggatatc ttttattttaacagcaacaccaatataattatcacctttttcttaaaattttagaggatgaacattgttcatcatttgaa atcaggagtgaaaaaaataaataatctttgatacctattcactgtacatgctcatagtgagattgaagaaataaaaaata ttccagtttagtgctacagatcattgtaaagttaaaagaggttgtactgcatggtggaaagcaaaattttatgacaatac atggttttttatcatggtttgtgtgtgttgcattctgctttctgtgaattacaccacatcctgcggttagtttggaaaaa agttggaataaaaggctaacgatgagcattctgtgtatattttgttttgcagaaatgcaatttaccacagtcaacaaagt ccacgttcctcatttgcttcagtcctgacaggtgaatacaaagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggaccaaaaaaattgaaaaatgttttctcacacacctcatggtctg ggcttaagtggcctttttgttgactgttgttctgggcccagttccaacaagaaaaagttgatgaccagcattgttccatg gtgtagcttacaagaatcaatacaaaaattcatgatattgtttacagcattatcactgaatgacgatgttttttttttct tgttgtcttttcttcccaaagcagtggtttgcaatgtgtcctttttattctttgttgtttttaaggcttgtggcattttc tcctctgggtgaccacattcttacagcagtcacaaatattgcagcaaaaacggtacttgatttttttcctcaacttgggg tgattatcagtagcttaaaccaactttggccctttcttacactgtattgctcttttaattccacagactagttctggaac cggtgctcaaaggtaaggcattgtttctatgtggcaaattgatattgtctcaccaaaattcaattatatttagtcgaccc acagggctgcaaatgactactgtaacaggcgggcgccggtcacgttgtccggtcaaacatgtttttgctcaaacacgact cttgcgatactgaaaccaggttccacattaatccttttataacaaaaaaaaaatgaatccaagtccgtttggcaataaaa attgcaagttaatagatttaccactctttgctttttgcactttgcaacaaatgttacgtggcgtaatctcggtacaccaa aattattctccgtgagaatgctttccgagcattcaatcaatcaaacaatcaatcactttactaattgggaacgcttaaag taaataaagtaacagaagacacaatgatttgcggtcataagaggaattgatgacactaacttttctagttttttttctgt ctttcggaaacataaatgttgtccgtcgtgattatcaaatggttaaaaattacaatttctctgtacgactcagtaatgga ccggaagatgtgtcctgctatccaaggatttgtccggtcagtgcccaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttttttccttgttaaaaaattaacacgcaa ttcaatgagttccaagtgttatttaagcttctgttagaaaggagttacattcacaacttagatctacatacttcacgaaa tgccggctcgaatgctttaaacagcaaattaactaatctaagtctcttcctcaagtttcccccatccaaaatcttactct gtttcgataaacagttaaagaagctgcaatatgggggtccgaatccgcgaaggggggctaaatctgcagggggattaagt ccccctggggtccaaattcgccagcggatttgtaccgggggtccaaatctagggggtctaaattcgctggggcaccggcc gttatttgcagccctgatccatcttcgcagtttcattcaggtaagcacggtttgtccaagggttttaaacatttttcctc caaggtgtcgtttgattccattctgtggtttgagaactttttgtccagacaatccagttactctatatgttaacacgcaa tgtatacaaaggaatttcttggtcatcgtcattattttagttttcctacatgtatggtacatggaaactgatttctatcc aacgcccacttgtttccttattaggaagcttgagcaaggacgacggcaacggcagcgacaacgtcaaaagacaatgatct gattggttgaatgaggaaaaataatcgtgctgcacgtgcggcacgcagtttcgatacaattttttgacgtagtcatccaa atgacaacgtgaaatttcgaaatttaaggttttaacgacaacgtgaacacacaacagttaatctttcattctctataatt atttacttcaacggcgcttctaccagtccatttgcaggatgctctgtcaacaataaagaaggcgtcgaagaagcagtatt cacaaaatagtcaccatttcccaaatctttattttcaagtgacgttttcgttgctgttgccatcgttgctgcttaagctc tcagttgttaattgaagaattgttggtgtccataaatgtctaggtgaaataggaatatccttgctggtgaaaatttgtaa tttcggaactatctttgcgctgtatttgttttcagtcattcatcgacagtgaaccggcttctgcaatcagttggtagttc tcgttcagacgcagaccaagtttctgcgtatatgttacgaccgaacgatacttcttcatcttgtgcaccgagtactagca ctgctacggaaagaaatgaagaagaatctaattccgttcctactgcggctagttcatcttcagtttcctccgggtctggg gaaaacccaaatccgggttcttctactcgacaaagaggcatctttttgtcttctttaagtagtcaagcatctgactcaac agaaaacgaggggggagattaccgaggaatgctgggtatttttcgctctcgagacaacaacacatggaatttccaggtaa caagcgctgaaagcagtcgaaacagagaaagcgaggagacggaggaagaaccatctacagattccgtcagttttgactca gagtccgcagaaacaggaaactcaagtgtcagtttgagtttaagcgcaggtgacacagatgtgtactctgatacaagtgc ttcttcgggaacaccggcgtcttttaatcctcagtattttgatccagtttctggtgaagagattccaatacttgacgaac caaaccaaggttccaacggggaccgtgtggtcggggtcggacgcgttataaatgttggccctagttcatcgcggactagt tttctctcccatgactcaaatcacagttcaagctttgcaaccttgggtggaagccagggatctggtactgccattgccac ggcaacggcaaggacatttaggcacgtgcacactgcggtggtagttgctgatgggacaaatggagggcctcagtttgctc tgaggaccgccatcaacagggccatagcaggggcctttgctggctgtggtgaaggagctgtggcaagtaatatcattaac acaacccaccgtttgcagtggtgggattttacccgcgtgcagttaccggatttaaaaaacagtaagtgctataggcgatt nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttcaaaaatggatgaaaaagaaccgcgaact agttgcggtacctcaaaccgacaatatctgaagatgcaccccgataattcgactcgaggctcgcttttaccggcgaagtc tgtcccaataggctatgagggaaaggaatgccttgattttgtttatgcacctttattgtaaaagtttttattttaaagct ggaattactctctttctcgtttggaggacatatatatgccttcgttcttctgccgcgcaatagtgcctattttatgcgtt gccatgtgagcttcgttcaactgaactgctctaaatctaccaggtcgctgctaaactttgtcattttctttgccaaggta acactgcctacaacttatccagagcgcatgaatctgaaaactggaaagaagcaaaattgttcacgagatttcaataacaa tcaatgatcaatgtggccactctaacattctacattcatctaaaaacggacatcaggaacttctgattgatgtttctttc ttttcttttatttcctttgttttagtcaatcatttctaaactaaaaacagatatttcctaccactctatcccgaaatttc ctttgcctttgccgcggaagttttttcaaggggttaaagctggcagtaatttggagcctcgactgcgtctcattgttgtc cgagttaaaacaacaaatacaaaaaaatatagtaataaatgccgt |
|
Protein
| Protein ID | aug_v2a.10551.t1 |
|---|---|
| Definition | - |
>aug_v2a.10551.t1 MTQTRRGESNIFRALMRREINCRGPDDRNLLLSYAEDSTIMSCEQGKKCNLPQSTKSTFLICFSPDRLVAFSPLGDHILT AVTNIAAKTTSSGTGAQSHSSTVNRLLQSVGSSRSDADQVSAYMLRPNDTSSSCAPSTSTATERNEEESNSVPTAASSSS VSSGSGENPNPGSSTRQRGIFLSSLSSQASDSTENEGGDYRGMLGIFRSRDNNTWNFQVTSAESSRNRESEETEEEPSTD SVSFDSESAETGNSSVSLSLSAGDTDVYSDTSASSGTPASFNPQYFDPVSGEEIPILDEPNQGSNGDRVVGVGRVINVGP SSSRTSFLSHDSNHSSSFATLGGSQGSGTAIATATARTFRHVHTAVVVADGTNGGPQFALRTAINRAIAGAFAGCGEGAV ASNIINTTHRLQWWDFTRVQLPDLKNINHF* |
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