Gene
| Gene Model ID | aug_v2a.10450 |
|---|---|
| Locus | scaf4006 : 2762 ... 12319 : + |
| To GenomeBrowser | scaf4006:2762..12319 |
| Genes list of scaffold | scaf4006 |
Manual annotation
| Study field | Immunity |
|---|---|
| Gene name | Adi-IL1R-8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.10450.t1 | gi|704524564|ref|XP_010084280.1| | PREDICTED: toll-like receptor 2 [Pterocles gutturalis] | 3.0e-18 |
| aug_v2a.10450.t1 | gi|678133421|gb|KFV02603.1| | Toll-like receptor 2 type-1, partial [Pterocles gutturalis] | 3.0e-18 |
| aug_v2a.10450.t1 | gi|704257070|ref|XP_010149780.1| | PREDICTED: LOW QUALITY PROTEIN: toll-like receptor 2 [Eurypyga helias] | 5.0e-18 |
| aug_v2a.10450.t1 | gi|704333914|ref|XP_010173033.1| | PREDICTED: toll-like receptor 2 [Caprimulgus carolinensis] | 7.0e-18 |
Transcript
| Transcript ID | aug_v2a.10450.t1 |
|---|---|
| Definition | - |
>aug_v2a.10450.t1 atccgacggtcagctggaagggatatctggtaaccattttctcgagaaagcttcagtgtttcaaagttcccaaggtaaaa taacaaatacgattattgccggtaaaatgaatcaaagttgctatttcatacaagccatggtaaacacttctcaaacacct gttaaaagtagatatagttgctcgaaaaaaagaaacttctttccagtcgtcattgcaaaatattgattgtgaaggtcctt cacccgttgctaagcagataatgcgctcaaacgaatgaaagctttatagcatgataggataacactcttccctggcaccg tctttccatatctttccacttgaattttgcgctttgaagaaagtgtagcaatctttggaatcttttgtgtcgataaataa tgtctcctgaactgctttcgctattcgtcagtacaatgccaatatttgccattatcaagtgaaataacaacatgccggct ttcaatgtgacaccgctgggtgtattgtttgagggtgatattaaattaataactgctggccatcgtcccttctgcgcacg cttggggtgcgttcgattggccttattccggaataagaaggcgaaggtttacatctaaaaaccacgtttactaaaatttt gatgttatcggaatacaaatgaaaatttgcatcatcgttttgcaacaacattttgttgagaaatcgtccttcatttaagg ctattccctttattcttattccagaatagggtcaatcgaacgtgcgcttgaagaaacaaacttttgtttccccaccgtag ctcaggggagtgaaaacccggtaggaaatcattgccaagcgcgctgaatacaggtccaagacttatgttccataaaaann nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnctaaagaagttatttttaccatcattctatgccactggctaaagatagaatcaagggaggaagaggaataat tggatctcaattatttattgttccttccatttttccgagttattcattattcattattcattattgaaattttcttcgat attaattttttagtttagaaatctggcgcatttatattcagtctttattctttaacgaaaagcgtaaaattttttatcac gaatgttcgaacgttaaccattgatttcactattcattttgtattttaatccgttattcattgcttgttaccccgctacc accgccaaaatcgaagaatcatgctgcacgcgaaccttgcatggttctacattcgatttattttgcggcaacaaaacgaa gcccactcatttctcgagtgaatgaatgatattgatccccatgccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnngcgtgtgtgtgtgtcttttgtttctttttcgcttttggtttcgggggatgggagggggaaagagaggagc aagctgagtgtaaggtcgtttccgatagcgcgctgttgctctgtgagatgcattcccgtttgaacccgatttttgtcggg ttcgacgaaaacgttgaactcattaatatgtatcagaacttcaaggctctcgaagtattaaacttggattcttatccgtg acctctgaacaactcactctcgaatggagttaagtgaataatttgcttgacgttattcaatttcttcttaaatgcctccc agctaggcagcagtaagaaactgactttatgattagctccatagtaggacaacttttattatgtaattccaggtaactgc atttccaagtcaaaagaggaagcaagaagacttgacaactttttacccaccagtgccgccnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnaagttacctcaatcttttttctctttagcatctgcatctccgccaaattcccgtcctaca acaggtgtgtttcttggtagtatttaaccgtccttttgcattgtggaaaatcgaaattcccatgaagagacgttaagtta tctcaatcttttttctccgctttagtatccacatctcgttcatcttcccgtccaacaacaggtgcgtttcttaatcatcg atttgttattatctccagtaaggtaataagtccccaacaagtcgatatagcgcagattaaagcaaacaggaaacgtgaat gaaataacgtctaagaaagcgaaaacgtgtgtttctttaacatcgatttgttgttattattttctttggtaacataagaa gtccatagcaagtcgatatagcacagattaaaacaaacaggaatcatgtaagcaattaaaacgccaacgacagcgaggtg ttcatctaaaaatgtatcgtcgcactttctcggttgttcttagtaattcggctcgaaaaatgtgtagttactatcctgga attaaactgattactaagagcggtctggagataaggagagacaaaacggtcttcatgagctaatgtcctccacacaacta cgaaacaaatcttttgacgtacaaataattaaaaacgcccgtgtggaggtcaccttgattccgcacaggttatggaaacg ccaatcaacaacagtcattctcacgactcttctcagccagatgatcacattccatccaggtatatcattttactttcgca gaaaggttttggttattcatcatggtgaattcaataatattaaagaattatcgtttgtctcacgctgtcgtcgcttgatc tggattgcaatgtttcgacgtctgatttctactagtctccttcaggcgatgagatcgacttgctccgcgtcaccttatga agcacgatgttctgctttaattggccggttttcaacagctatgactggagcatcactttactttattctttcatttaaac tcgacgccgttgactcacggtttgagttatcaaagcatgaaccaatatcgttcttctgcccacagctgttgtgaaaattg tggcaatatcctttggagcctttgtaggcttggctctctctctttggataatcgtcagatgccgccggaagccaaagatc gatcgcccagaaggttgagtattatgtctccctgtgtcattgctttcgactcttgatctccattgtattcaaacgtctca agcagagttggtttaagttgccaaaactcggtgtcgtttaccagcagtccaaaacgcgttagtttgaaaatattaattac cagatttcaggaacaactggaaccatggacaatcagtttaaaaagcccgtgaaagtttggagcttattattcttattgtt actggttttaaacctatacctcattactgttattcagaaagcattggttgcattaagttagcttgttttttgaaaaagtt gagttagtatggggcaatggaaatttcagttgcaattgaatatagtcgtcacttgtatacaccttattccaaaatggcgg ccaataaattattcttttgtctgcatgttaattagcccttgatgcctcgtcagcatatagaaaacacaaaggaattttaa gtgaaaatgaggcaaagagggctaattaatatgcaaacaaaaagaatgatttattggcggccattttggaataaggtgta tgaagccgttgaaatgctacagataaacagatatcgtgcaccggttatatcgagttactttgtacttagcagtggatttc tacaaaatgaggtgatccttccgaattaagacattagaataaaatcatgggaaatagcggggaaactatgcagagagttc tgcgtttccagcaaagcaaaaaggatgaaccaataatgaactgaacccatctctaaagccaggtctggaaaataagccag gattatatcggcctcattgctgtgatacaactggcgccggacctttcagagtttaccaagttgccattagtcaccagcta ctacaaagtaataaatgtcctctgctcattgcttcacttctaaattgccgttaattgttgttcccagatttccagtacgc tgccttcattgtcttcagcttctcggacgcgaaactcatggaaaaagtgctttactttctagagacagagcttcaactta agtgttgcgtacatttcagagactttgctcccggtaaaccattcgtcgaaaacatggcgtacagcgttaacaacagttac aaagtcgtgatcttgttttccaacaatttcttgacaagcgagttcgccgaattcgagatgaagcttgcgattcatcgaat ggtagagaggagggacaacagcttagtagtcataagaattgatgacgtcgatccggccaggttgccttctgagctgatca cgaagagttttatcgattacaatagttatttagaaaggcccttttggaagcaaaggatactcgagttgttcaacagtaac accccaagtgacgatcaaaccatttgttatgagcacacagatagaccaccgtatacaagactttgtagcacgcttagcac tgaatcacaaatgtcttacgtgtagcaagaatgcaaaatattcaggaaggatacaggccgcttcaacttacaaaaaagga catgcaaacgtaccgtacacagctttatttcgaatcttaacttaagggggctaggtcacgctgttttaggtaattttgtt ttattttgttatttatgagctctaaacgtcaaattggcagagcaagagtctttcattttcagaatcacggccatataaca actgagaaagattttccagctgtttaaatgacattttgatgtaaactgatataaatttgaaaaaaggtgggccgacgttt ttcaaatttacccaaatgcaatccatttcaatccttcccagttttgtccatccttgtcccttcccagcccttcctgtgtt ttgtttgagttctatagttttgagccgttattttgttatttcagttaattctatgaccacttgatcaatgctgaaattgc ctaaaattgcgtgatctagccgctttaaagtagtctaccttgattgaaagtgatcatctgggtgattggagtcctgagaa ggactgttgttggtgactgacgcttggtcaacctttgcggaagctatcttcagagtgaagtcccaggataagtcagttga aaattcaagaatcctggtgagcgatttgattggtcattatttagagtagccgttggtaaacgcttgatgtgattggctgt gaagacgtgtgcggagaaaacaaatgaactactaaaaaggatgatctcaacaacaacatcgccgaacactattcaaaaac aagccacactatagactgggattctgttacgatcacactcgaaagctggtttactaagttataacaaactgccctcaatc gttgacaacctcttcccgcactttacaaacgattactcaacaggaaacagcaacacattgtatattattcatcttgcaac tgatctacttacttaatctccgcacaagtcttcacagctaaattacatcacacgtttcacaacggctcctctatctattg atcaatcaaatcgcccgccagggtttttgaatttttaactgactaaaactagcacttgactctgaagatggcttccgcac tggttgtcgaaacgtcagtcgcaaacaacagtccttctcaggactccaatcacccagatgatcactttcaatcaaggtat gttactccttggttcaagccgttttcttatttaaagtagtctctaaaccaaatgaaaagcacattctttgaaggagtgtc ctagctttaaatatttttgggatccgttggaccaggggcattacattcccgagtctgtgatcctggctggcaaaagtatt aaaccaggaaagtcatcttcccgagaacgatatttacaaatgagagttttgtacttccaacttaccaaaaatcatcaaga cgtcttctttgtgaagtgtgtcatccatacacagcattgttgcagtcgtaaagcgattttttttcccttgtaacacgaaa aataagagggtaacgaaagtgaaattggctgttttcaatctaaagaaacaaattacttgagcacgaaaacgaggacgaaa tcaatgtaccaaacctctggcggaccatgtgaactcttactcgtcttcgttttaatagcgaccttcagattgcagcacaa ggacgactacgagaacgagttttccgttctgagcaagcgctttaggtttggagggcgaaaaatttcgaagtgcgcatgct tagaacttctcgtagtcgtcctcgaactccaatctgaaggtcgctaactactttagagcgtagggacttgctgatactga cacaagccgttatacctgacaccaaccaggaaaagatgtctcaactggatcacttacaaaggttttaaagtgatttctcc atgcgtttctttttaagagagttcagcatcaaccaaattgtaaaggtatcggctgtgccatgctaataagggctaaagtg gcagaaatagctgtccatggttgcctgataactgcccgggtgatatggttctccgcatgcgtaaggtgaagggcacacca gagggctggtgtaatgtgtgacacctcgctcttcaagccatttgccagttaactatactccgcttcaatatgtacacata cactcaaggttccacttttggcatttattccatagtggccgcatattgcgggcgacatgtctcacgtttttgctctttat tgtagttgtctaactttaaaaacgtacttccggaaagtctctggcacaaatggaatttaaaattccgacaccatgcaacg ttcgcagtagaacacgaagctattagtagaagcgaggtcataaatgcaacttatgtaatgaagtctatattatttgtaaa tactgaaatagaataaaaatgctctgtttattcaagctgatttgtgctttgctgtcaaacttactagttgagaaacacta ctccttgataaacacaacacaattcaagaaaacttgtcaacgtctgtttaaaggagaactgaaggtaaaaagccaactat tttcctatggctgattatttcgaaatatcatctacttgtgataaaaaaccaggaaaagtcctcattcttctctatgatct ttatcctgtaatctggacactcattctctaagaaaaatttcatcttttgcgagaaatccatgataagttgcgcatctagg ttttttaatatcaaaccacaacgtctcactgcactactctgtcctggggcctgtttctcgagagtcccgaaacatttcgg gcacaattcgggtgacataattctctttgtatcttcaaaacgaaggcgtctcgaggcacgaaactttgcagttatttgta tttttattccctttacaacatatgaccagctttaataagcaggccggagttttacgaatggcttttcgggcccgaaaagt ttcgggactttcgagaaacgagcccctgttccgtaaccaaattttgagccagtagtgcgctcagtgacgtcacgcttaat ccccaagcctgcaatggggactgggtgtgatggttaaaatggcggacttctcttgcggacttttccaccttcacaaagac gtcaaaatgtaagtaacctccctaatactggagcatttgctgcaattacgtaaagtacaaattcagctaccaacaacaga taccaaaccaattattctcacattcgaaatcagtgtgatgtatcatctaagacacaatgaaataactaaggctatgcagc gaaaaaaaaaacagtagtaattaattcatagaaaattctagaactagcttagtgctgcgttaaatgtttttttttaatat ttctgagtaaatttcggcaagaaacacgcaatttcttcgcaaactcataagcgattatatctcttaatttacttacgaac aacaaggtttagcaatatttatgtcatattctctaaaacaaacaagtgaaatagtgcctcggggttatcaaagaatactt gacaagaaaaaataccaattaggaaatgctctcgaaagaggactagaacatctaaattaaggtatcacagcataagatga gatctaataacggtttaagcaaacatgcttaacgccaaattctttgaggagaattagtttttagggaaatggacgtcacc cggaactccgcgactgccatggaaactgtcacgcaagaactcaaacagagaaatagctggacctattgaaagcaaattga aactcccatctagattgcaaaatgtttaggttgtcgctgttttgtttatggaatatctgtttacatttatacattaaatt accgaaaaacgtgactaatttatgcatgtgtgaaattgacgaagtcaaaggaacaatgaatacttcgtcaacaatttgca tcataatcgttccttagacatagcataactcattcggaaaaatgaaggacaagacgtgaatcaaacgatggatctatgtt caagtttttcctggcattactcgacgagcttgccacagctatacaactgaatttccaatgtcgaccagaaagggccaatt tgtactagttgtcgcaactttcctgtttgtttatacttcctgtgcttcgctggaaaagtctgagcaacattttccgagga aagggtcaaaaagttgtctcagaagatgtctgcgtcgacaagaacactttcccggaaacgtaagttgtgatttcgaatat cagtctcttttctttgcgaatgaacatgatcataggct |
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Protein
| Protein ID | aug_v2a.10450.t1 |
|---|---|
| Definition | - |
>aug_v2a.10450.t1 SDGQLEGISGNHFLEKASVFQSSQASASPPNSRPTTVSTSRSSSRPTTAVVKIVAISFGAFVGLALSLWIIVRCRRKPKI DRPEDFQYAAFIVFSFSDAKLMEKVLYFLETELQLKCCVHFRDFAPGKPFVENMAYSVNNSYKVVILFSNNFLTSEFAEF EMKLAIHRMVERRDNSLVVIRIDDVDPARLPSELITKSFIDYNSYLERPFWKQRILELFNSNTPSDDQTICYEHTDRPPY TRLCSTLSTESQMSYV* |
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