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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaug_v2a.10284
Locus scaf3940 : 34886 ... 44740 : +
To GenomeBrowser scaf3940:34886..44740
Genes list of scaffold scaf3940

Manual annotation
Annotation by Blast2GO
Annotation GO
long-chain-fatty-acid-- ligase 1 GO:0006631 GO:0016020 GO:0042221 GO:0043231 GO:0044444

Blast Hit to nr / sp
query Subject ID Subject Name evalue
aug_v2a.10284.t1 gi|759131178|ref|XP_011362318.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 [Pteropus vampyrus] 6.0e-11
aug_v2a.10284.t1 gi|700384552|ref|XP_009932269.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 isoform X3 [Opisthocomus hoazin] 6.0e-11
aug_v2a.10284.t1 gi|586520821|ref|XP_006916439.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1 [Pteropus alecto] 7.0e-11
aug_v2a.10284.t1 gi|558167017|ref|XP_006098163.1| PREDICTED: long-chain-fatty-acid--CoA ligase 1-like isoform X1 [Myotis lucifugus] 4.0e-10

Transcript
Transcript IDaug_v2a.10284.t1
Definition-
>aug_v2a.10284.t1
attcactgttcaataggtttttggaatatttctcaatttaggaccctacacaactgttaatgattcaataaggaaccttg
taagtaccaaagataagctttcctatagtcatcagagaaatcccaaactctgcaacagaaaggcgatctttagcgatcta
tgatcttgagtgcactccggcgcagttttatattttgttgtccgctcagtattccaacaactcacttgtttgtaaacata
tctaacttattgtccattgtttcgattttcagtaaattcaagttgaaagatggttgactatgccgcggtggagccgattt
tgacctatgttcgcgaaccggccttcatagcagcttttggggcactcgcgctaaccacactctattattttacctctcga
ccaaaaccgcagccctgtccggtcgacccagagaggcaatcctacgaattaccggcaagtagttcaacagctacattgta
aaactcacttgcgttctagtttagctatgttctgtacaataatgtcttgttcatcgacgaaagtaaataaattgatagaa
caggttccttcctgcgcggcgttctcaaatgtttcgatttcgcaaacaacaaagttcataatatctccttaatctgagaa
ttccataatttggaggagagttttgattaaagaatacattagcgataaaaaaaaaaaggaaaaaaaaaagcttttcaagt
cttggaaagaaatcggctgaccaacaaagttttcgtgacattttcttgtttacttttcttgcccaccaaaaaaggggcgt
gttagtaggtgtaagcggagatgttggctgactgcaattcgctctcgccttgagggctatatattaaagcgaagggtaaa
catcgcatgaattcaaaccaacagtaaaatagcaacaacgataagcgtgaaaattataaaatagaaataggtcgctccca
aaaccacaattagatcagagctgatctgcagcctcaatgctgaaatattcccgttaagaaacacaatatattaagccttg
cttgttagttttttttgttttgttctatttttttttcttttatggctaatttattaattttcctattttaaagctgttgt
ttaaaatgagcaaacgtaaagttcgtgagccaataagtttatattattttgtttgagttgcccctctggtgatagtgcta
aaaatatctctaattggaagacagtatgaattagcaattttgtgccaataaataatgatcatttaatttcatctcaagtc
ttactagcaattctttgtttcctggaacaaaagagtttgattcaatgctaacttttcatacaagaaatgattttctttta
tttcggcacacaaaaatggccatgtcatcgcttgagtgaaagcaagagatatcccaatcaatttttctttcaaacttcaa
cttcatgtattcacctattcaattatctcaggatgaagatggtgctagaatgaattccttaactcctttaatcatgattg
agcttgtcgtgtttacatataatgactccttcacctcaataaatttgcttttcaaacttcaactttgtttattctcctgt
ccaatttattatctcagggtgaagatggcgccagaatgaattccttaacgactgagcttgttgagacgctctttgatgac
gttaccacagttcatgaagcttttatgagaggagtgaggttatcaggtagaaggataaaattgtataagtttgctatttt
acctctttcacaatggttttagtttcataataattgtttttaatttgtgctacagtatcttgaataaaaatgatgatagt
gattgatttataacattgcattaatttactttatatacatgctgctatattaatgcattatgtgttttaattccttcaat
cactgacacactttaaatttgtaaatggcaggataaagtattgtgacattaatattacatggttagtgagagccaaatta
ttggatctttgcatttgctgagctcggtttagcttgttattaatgtctcaggtcttgaacatgatcactaatgttaaacc
agttgagtttatggaccatgaatgtccacttttccagtattataggcaatcaatttaaaggtttcgttgtaagctgccaa
aaatttagttctttctgaattttattttttgctttttaatttgagtgtgaataattattattattgtctaatattcaagt
cttgtttattcaattttgactataattttggctttatgaacagcctactgtatgtaatatttgctgtaacttcagtttaa
ataatattcagcaaattgcaatatattgatacttaatacttcaaaaaagaaagtttcacaactaaatctgttttcctctt
gatttagggaataagccttgcttgggttatcgcagcagtccagggggtccttatacatggctcacttacaatgaggtgaa
gtgttatgatgccttttaatgtttactgaattggggactgggatatcactttgtagagtgtttttnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
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nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcaattgttccactgtatgatacccttggcccagatgcctgtg
tctatattatcaatcaaggtattaaaaacattgacattcatgaattaatattccatttcaataataataacagttactgt
aaactgctaatacatgggcatgcaaagatctttctctttgagtgttcaacttgatatctcacaagtgagcgcagtgaaca
agagagatagtgagttgaacactagaggaggaatctcatatctccaaacaaccttcaatgatttttgtttattatatatt
aacaccttactaacaagaagaagctgcctttattgacagttgaaaaagagaacatgttgccattcattcatgcatggcac
taaacagagcactaaacaaaattatcataatttttcacttgtggttatatggtttttctcagtagtggaaatccctatga
cgcactccagtttatgtaataaattatgtttgtcactaaacaaaaaaaattcactccattgaagtctcccggggatttaa
agcagctgagagctgctcttttaattatcgaggagattacaaatcaaactactgtaaattaaataacaacaaatcaaatg
aacctttgttttttggtgagatgtaaaaccaggattacttgtacagagttggaaataacggccagtgatcggtaattacc
gatcaaatttgccagtgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncattagtggtcaaagctttttt
cagtgttgtggctcctaaaagagccgttgtttataagagccagtgttatatacaaaatcaatttagtccaagctggccaa
cttgttgagaatatctgccaagaataaacgataattgcccagaagtgaacgataattgtgttaacaattttaagttctta
gttcaagttgaactgttcacgttgtgagttgcctttcgacaactcaaatagaagactcaaataaagtagacaccaatgtc
acaacagaaaattgtacgtttattgggactttcaaaatgtggaggggggggggagggtaatgatttgcaccttcaaaaaa
aatctgcacctatcaatctggttttccttatttccaaccctgcttgtagtgttgtttgaactttagtaattcactgtagt
cttcccttggtgccaattgccgtagacagtggtggctcagtagcagaaatgattgatgtttttgcccatcttgttaagct
cgaatgacgacagtagcttgtgacgagggtaaactcaaaatttttttggagcagtgcaccaaatgccccactctgaaaaa
tgtggtcaagattggtgcaaaagtaactgatgaagagaaagctgcaggagatgaaagtggagtgaatgtcattgcttttg
cagagttagaggtaaagaggaagatatattttgtattcatgtttgactgattaattcttggaaaagtcatagcttgtctt
actactctgatttaaaaggagtggaagttataaagttatgattttgttaataagactgcataagataggacacaggtaaa
tagctgccaccatgattgttacggttcaaatgagtgtgacaccaacatctttataatgagaatgaatgttaattagatgt
gcagttaaatgtnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
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nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
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nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngcactctcctggcaaatatgtcgatgtttaacattat
gaaatctgaagcatgctcatacccatattagtgaagacaagaaaagtatgtgaacagtagttgagcagaaaatgatctgc
agggttaggaaggaattgacaacttttaaaaggaaccctttttgtcatggtagctgggcaaatgaaggaacaattattga
ttaataacgttaccctagtaattagggattgccgaatttagtcttattcaaattataggatgtgggctaaaatctgtttt
actgaatggaatattagagtaccgaatttagtctttgtaatatcattagaatttgctggggccaaattttgagtgcttcc
taaaatttagagcataaacatagaaattaacagagcacaatttacgtgaacaaacaaaatttacttgagtaattcacatg
ccataatttagtgcctttaacatatttctttcacaattggcaaccattaattctgacactttcctgttgagctgaaaaat
ggcagggaactgcactgccattatttttaacacatgattgagctaaaacaaaaaaaagcaagtcatgtagcatctgatct
tcatagtatgtgttctattaaaatatgctagagtgcccttatccttcttttgctcctctttttgtgttgaaaactcaaat
attggttgttttactctcaaaagggaaccctaaaggcgtaatgtcaactcacaaaaatataacagcaaccttgggtagtc
tcgtgttcattgttgaaaaggtatttgtacaatttcttgagcaatttggtacatgtagtaaaaattaattttcttttttg
gttaatattattttgggcgttatatataatacttttattttattaacaattcctggttttacatggcattttataaatcg
tgtatttttcgctcattacacagttaatggttcgctgctgccatctagaaggggtacaggggtggcgcagggggacaagg
ggcgggaacccagggaaacagggggagctcagggacgggagatagatacagtagagggacattaaatagctatatcagga
gacattagagggcgggaggtgagagatagggggaactggacgaggaaggtgtaggaggtgggaagattggtattagtcct
gttaatatataatactatgttaaaattgttaatcagtggctctgctgacaaatagccgaagcctgtaagtgaattattcg
ttttcgtttaatttacttcttactgtacgaggtaatatggaattttcgctcgtcacgaaaatttgctcatcattcaaatg
attcatgaatcacggttcactaaatagagcggctttcaaatgactgtcgaaaaaccaaaaccaaaaccaaagcaattact
ccgaccaatcacagcaggagcaggcagcgcgatgaaccaatcacaattcctagcaattacctgtaactcgcccgaagcgc
gggaaacatcacgcgtacatcgtgcgattggttctggttttgcttctcattggttgaaaaactggcgcgacttttttaag
ccaatcactaagcgtagcaatcgcaatcacgtaattactttcgacagtcatttgaaaactgctcgacgaatatcaccgat
cataattgacagctgttcacgccttcatttgcgcgcttttcactaatcacgagtattttttatctcaaatcacgcttcac
gcataaccattaagatgtaccacggtgatgcttgatagtgactgacgtcatagttataataaactatgctgaggttatta
aagtgatgttcctattttttagcttttgtcctgttatgaatttcacagtaatacttaaatgattttagtgtaaatgatct
ttgcagttatgagcaagagagagacctgaaaattcagacctggggcccctttctcagaagtcccgaaactatagaccact
ttcataaatggcggcttgttttgtcattcctttgtatttatgttaattagacttactagcctcactttggttcaaatatt
ctttagaattttgcgcatggcagcgacgttagtatacaactattccccgaaggggaggtgaatagtggtggatatatacc
gagacgcgaagcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
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nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttatttgcattaaaacaaaagaatattaaat
ttgatcgccattatgaaagaagtctattcgggcgcatttcgggtgacctaattctctttacaatatatgaaaaaaaaaaa
aaacagcttcacagagtaagcgggtcggagttttacaaatggcttttctgactcgaaaagttttcgggacttgcgagaaa
cgggcccctgaacgggactcaaaccctgatctctgcaatgttctggcagtgctcctgaatttttccctctgcttaagtaa
cacagataactgcgaggatcatttacattgaaatcatttcaatctgcagttaaaatacataaattttatgtattcacata
atgagattaatagtttagagagcggccaaatgtccgaacatacttattgcacaccgtgttggatgaaaatgtttgatcaa
acaatgttttcctgcttagccaactatcattgtttttggtgaatacgacgttggatgaaaacatttcaacatttcagccg
gaatttcatggttgtgttgttattttcagtgtggaattacttacagcgatgcagaggtccatttgtcgtatcttcctttg
gcgcacatgtacgagagactcgctcaggttggcatagagataattaagttcattgtcccagtggcgtctcggtttctatg
gttaatttagtaatttttttttaacttattgtaaatcttttcccagttgcggctcacacagcccgtttacacgacaaaaa
aattgagcacggact

Protein
Protein IDaug_v2a.10284.t1
Definition-
>aug_v2a.10284.t1
MVDYAAVEPILTYVREPAFIAAFGALALTTLYYFTSRPKPQPCPGEDGARMNSLTTELVETLFDDVTTVHEAFMRGVRLS
GNKPCLGYRSSPGDACVYIINQARMTTVACDEGKLKIFLEQCTKCPTLKNVVKIGAKVTDEEKAAGDESGVNVIAFAELE
GTLKA*

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