Gene
| Gene Model ID | aug_v2a.10282 |
|---|---|
| Locus | scaf3940 : 10910 ... 12904 : - |
| To GenomeBrowser | scaf3940:10910..12904 |
| Genes list of scaffold | scaf3940 |
Manual annotation
| Study field | Photoreceptors / Circadian |
|---|---|
| Gene name | Adi-opsin-2 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| melanopsin-a-like isoform x2 | GO:0007165 GO:0016020 GO:0038023 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.10282.t1 | gi|156363565|ref|XP_001626113.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.10282.t1 | gi|156396685|ref|XP_001637523.1| | predicted protein [Nematostella vectensis] | 1.0e-26 |
| aug_v2a.10282.t1 | gi|573886210|ref|XP_006630959.1| | PREDICTED: melanopsin-A-like [Lepisosteus oculatus] | 1.0e-21 |
| aug_v2a.10282.t1 | gi|657588572|ref|XP_008298630.1| | PREDICTED: melanopsin-A-like [Stegastes partitus] | 6.0e-20 |
| aug_v2a.10282.t1 | gi|704200582|ref|XP_010142035.1| | PREDICTED: melanopsin-A-like [Buceros rhinoceros silvestris] | 7.0e-20 |
Transcript
| Transcript ID | aug_v2a.10282.t1 |
|---|---|
| Definition | - |
>aug_v2a.10282.t1 aggttgcgttacttatggtttttttcattacttccttatctgctgtactgtttcaactctggctgcgatttcagtggacc ggtttttctttattacgcgtccaagccaagcaaggacggctcagatgattacacctcgaaaagccgtggcaatgctcgcg atcatatacttttacactctgatgtttacgtttccaccttgcattggttggaataatttcgaggtcgaagagtcatttta cagtggctgttacatcaactatgccgatcaaagagcttcttcgatagcttattcaatcattgcgcctttttttctttttt tggtgccattaacgataatgattttttgctacgcacggatttttgccgttgttcgtagaagcacgcagcgaactatcaat cgaccgtttggagcgcagtctttgaagcgctacccccttctcaaaaggactcacatacaaacagctaaaattattgtggt tgttattttattctcgatgattgtttgggttccctatgtggtcgtttcctttgtcaaagccgccaatggcaaagtaaacc cactcttgtcacacataacggttcttgttgccaaatcttgcgtggtttataacgtgttaatttacgcggttttgaatcgt aaattaaaagcgtcaattttggacgtcatttgttgtggaaagcagaactttcgtatggtcggatccccaagttctggcaa tagtcttcaacggaatcgaaacagccgttttttaagccaaagagaagtgccatcggatatagcagagtctctgaagaacc gcgccagtacgttatcagtacaagagggaaacggaaatgttcatgatcaatacacagacaatatttcgccctcgcagttg acgcaattgagaaacggcgttttaaaaagtatagatcacgtggatggtcgggaaagcggcaaggttgtgggaaagaaaga ggttgacgtagtgcgaaacggagacaaagttcaagtcggagagtcgagtggtttctcagaaacacgcatggtgatagcaa cacaggaaagggattctaaaattcttggcccatcggacgcaaggtcaagtgatcgtgggacaaatagatttcttgcgaga ttagaaacagatacacttcctgagatagcaccacaggacactcacctcaaacctgaggctgtcagcaacgcgagtagttt gtcgcgaaatgagacccctcgcgtggattgcaaagtggatacaccactatgcaattcgtcttcgtccaaccgacagttaa atcgtcttcatcacatgtattcctcgaaatcgtcgaggcatgcgcgtttgcagaacttatcatcgccttcgcaattgtat aagaaaggagcacgtccggcgagcgcgcaacgagtgactggacatatcgcgagtgattcgaggacttctcgcgcgggcgt tagcagtggtacggaatctgatgtctcaacgagagcttctcataggccagcgacggcgcagagaccgaaaaagcgccgag cagctgacagaacaaactcgacacacacgtcggaacggcgaaaaagttccagctacataaactatggaagaaaagacagc gttgatcctctacggacctcccccaaggagctgtgggaaatacagaattactggaagcgaatgagcttatgtttggacga catcgacgttgatgaagtgacaagagagatccagttggtttaattgtgggcctggaaatgagcgattatagagataaatt ttttttacatttgaaagtttaaatttctttagtacaaccatttaaaataattagagacctttcaatttgcattggctctc aaaagcataatttattcacttatcactctttttgacttgggattgtcttcggtcataaaaatgaatatgaaatttagcgt ttgagaaatgatgacgtgaccgacaacgttacaaatcaataacatgattggttgaaggaggaaaaattgtcgtgc |
|
Protein
| Protein ID | aug_v2a.10282.t1 |
|---|---|
| Definition | - |
>aug_v2a.10282.t1 MITPRKAVAMLAIIYFYTLMFTFPPCIGWNNFEVEESFYSGCYINYADQRASSIAYSIIAPFFLFLVPLTIMIFCYARIF AVVRRSTQRTINRPFGAQSLKRYPLLKRTHIQTAKIIVVVILFSMIVWVPYVVVSFVKAANGKVNPLLSHITVLVAKSCV VYNVLIYAVLNRKLKASILDVICCGKQNFRMVGSPSSGNSLQRNRNSRFLSQREVPSDIAESLKNRASTLSVQEGNGNVH DQYTDNISPSQLTQLRNGVLKSIDHVDGRESGKVVGKKEVDVVRNGDKVQVGESSGFSETRMVIATQERDSKILGPSDAR SSDRGTNRFLARLETDTLPEIAPQDTHLKPEAVSNASSLSRNETPRVDCKVDTPLCNSSSSNRQLNRLHHMYSSKSSRHA RLQNLSSPSQLYKKGARPASAQRVTGHIASDSRTSRAGVSSGTESDVSTRASHRPATAQRPKKRRAADRTNSTHTSERRK SSSYINYGRKDSVDPLRTSPKELWEIQNYWKRMSLCLDDIDVDEVTREIQLV* |
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