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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaug_v2a.10256
Locus scaf3932 : 139521 ... 143445 : -
To GenomeBrowser scaf3932:139521..143445
Genes list of scaffold scaf3932

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
aug_v2a.10256.t1 gi|499027512|ref|XP_004564490.1| 7.0e-14
aug_v2a.10256.t1 gi|56269219|gb|AAH87479.1| LOC496066 protein, partial [Xenopus laevis] 1.0e-13
aug_v2a.10256.t1 gi|657586053|ref|XP_008297249.1| PREDICTED: protein JTB isoform X1 [Stegastes partitus] 1.0e-13
aug_v2a.10256.t1 gi|657586055|ref|XP_008297250.1| PREDICTED: protein JTB isoform X2 [Stegastes partitus] 2.0e-13
aug_v2a.10256.t1 gi|573908340|ref|XP_006641889.1| PREDICTED: protein JTB-like [Lepisosteus oculatus] 5.0e-13

Transcript
Transcript IDaug_v2a.10256.t1
Definition-
>aug_v2a.10256.t1
aaacggccgatcgtgaaatcgaggcatgtgaaaatgaagcaatggcggattcttgtgattgttttgggcgtaataatttt
acttctagtggcaaatttcaggtacattttgcgggtttattttgattcaagtaaatattatatcctatttcattcaatta
gtggtttgctctcttttttgcagtgtgcagatttcgtcaagaaggcgaagaaatagctctcaagttagcgatcacaaaaa
aaatacgtcagctgcttttgagaaaaatcacgcaactcgccgaaaatccaaaaggaaaaataattcaagcgccattggta
agtatttttcggtgcaatcgttgaagaaaacgatgaaaaaagtgatgaaaattaatcgtgtgataactcgaaagcagttt
tgtttcgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctcactactttctgagtaatctctacaagctgttatt
tattatggtagttattacttacacatgcacaaatatagtttttcattgtatatacggtatgtacatatagtaactataaa
aggcaatttatttttttatgatctgttttataatttgttgggaaaaaaggtcgtagtaatggaatgttgcgtgcgtggct
cttggtcattggaaagtggatattccacacttaagtttagtttgtattgattaacacttattataggtgatgctaaaatg
agcccaaattcaatgtgttggaagaatgaagaaactcagactgtaggagaatgcattcattgtagtgattatgaggaggt
gagttacagtagcaatagagcatcattgatattgtcagccttagaaaactgacacatgcaatctgggaagcaaaacaact
gaaccaatttgatagagtatcactttaatgtccccacttcctaccccttggtacaatatttgaggtgttgcaaacaaaga
tggggtaatgtgagaagaaaattatactattcttcaggatatcatcagtcaaatggtattgacctcaaaggttatttttt
ttcctgctaaatttgtgttattgaccattttcatgaaattaactggggtcttatgttttttacagaggacgttagttgga
tgtcgagagagtggaaacattcaacttactatctgtattgtctcaaatatcaaatgttataagaggtacgtatcattaag
gaaagattcattgaaattgcctcaggagtgtcttcattcatcattagctgatagtgggtgtggaggagtcttcactgagt
aaaagtgctcaatgctcgctgcagagcattatgttaatattagagagctttagattggagaatgagagcaaagagtacaa
gtttgctggtttggtcataatccccatgcatggttgtccatgacatgatatgtaacgcagaccaggaactcattttcaat
cactcatcaacaattaaattttgaggaaaagtcatcttagatttacaaaagtgagttttgtgcttccaactaatcaaaaa
tcatctatgtcaagtgtgtcatctatattcagcattattgcagtcatgacatgatttctttccatgcaaacacgtaaaaa
acctggttaaagaacatgaaactggttgtcttcaatctaaagtaacaaaattaattacctgagcacaaagatcaggatga
aagttccagacctcttacagacaaaactcgcacccatcttagttcttgttcctggatctaaagctctcttgtaacaatca
aagacagagaatttgttgtttttaacttagagtttaatgctgatgtgagattatcagacaggcttttgtttgttgttgtt
tttaaaccaatttaatgatgggttagtaaagcagagacaatgtaaagcaaaaacaacagctgattctgatgcactgtttg
aaattttaaatgcccaagaggcaaatcatcctagtaaatggattatctgtaactcaaagcaatgatcatgatttaaacat
tgtagaaataatgctaatcctagatttttgcatgtatgttgtgtgccaatgtatgataaaaaatggcttgttatgttctg
tagttgtccacatgttatagagtgggaggagaaaaaattctggatctttgaggtaaggtgaagtcgttttttttctttta
atctgaataagataatcgataattattataaaattgtaaccacgactagggcacagcttggatttcatgggtttccatgc
aacagatttatattatatgaaaatgtaacagcacagtaccatatgaaccttatttaaatatggctgaacgagctacagaa
tttagttgtacagtcacacctcaattgttcggatttttcaattatctggactcacttattctggtcccagtttttcatga
atattaattactcatattttgtatctgcaaattcactattttccaattgtccataatgcactctgtttgccccccaaatt
ttgcataaatcattgttgtgaaatactcttggtaggtctgcannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
ncaaacaaagtgcattatggggaattggaaaatagagaatacacattaattttttgtttcaaattgtgatgaaactccga
tgttgaccggattcctgaggcttcaaagcacaaacctgaacgtgtttcatgctcaattgcgcataactactactgtgcat
tttactgagttttgattggctcaattttttggttgccaagtgacattgcatatgctcatggcttagttattcagttttgt
tcttggctcttatccatactcttgattatctggaccattcagccaagtccctacaagtccagataataatgaggtttgac
tgtatttggtttcctttcaatagggtttaatgctcctggggttaatggtttcttcctctgttgtgtggtatcgacaaaga
caactggacaacattttttaccagaaacttcagaaacaagtggagagtgacacagtatagcggatgacattatttttagt
atttatttattaatgaatgacattccttttggaaaaaatgtcttcttgggtttacgtgnnnnnnnnnnnnnnnnnnnnnn
nnccgatttttccatcctcacaccaggagaaagagcaatacaaagaactacagtacaatagtcttttaccctggaaaaat
taacgacacacaacttttttcactttattttttattcgtagtcaagattatggacaactactttttatgtagtttgtaaa
ccatcagcctgagagtataaaatatatgattgacttgattaaatgcaagacatgagatcctttttgctgcccgtattcaa
aaatatgtgtggcaaacttttgttggattttatttgcataggtaatattttggcctatttgtaattaaattgtaataggt
gtggacaatacagcttgttgtttggatttttcttcatacaaggggttgaaagtgaagattagcaaaataaaattcctcat
gaaat

Protein
Protein IDaug_v2a.10256.t1
Definition-
>aug_v2a.10256.t1
MKQWRILVIVLGVIILLLVANFSVQISSRRRRNSSQVSDHKKNTSAAFEKNHATRRKSKRKNNSSAIGDAKMSPNSMCWK
NEETQTVGECIHCSDYEERTLVGCRESGNIQLTICIVSNIKCYKSCPHVIEWEEKKFWIFEGLMLLGLMVSSSVVWYRQR
QLDNIFYQKLQKQVESDTV*

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