Gene
| Gene Model ID | aug_v2a.10255 |
|---|---|
| Locus | scaf3932 : 120939 ... 123435 : - |
| To GenomeBrowser | scaf3932:120939..123435 |
| Genes list of scaffold | scaf3932 |
Manual annotation
| Study field | Photoreceptors / Circadian |
|---|---|
| Gene name | Adi-nr1d1-4 |
| Study field | Photoreceptors / Circadian |
|---|---|
| Gene name | Adi-nr1d1-5 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear receptor subfamily 2 group f member 1-a isoform x4 | GO:0000122 GO:0001764 GO:0001893 GO:0001937 GO:0001972 GO:0003707 GO:0004879 GO:0005634 GO:0007519 GO:0008270 GO:0009566 GO:0009952 GO:0009956 GO:0010596 GO:0010870 GO:0010977 GO:0021796 GO:0030522 GO:0042803 GO:0043401 GO:0043565 GO:0044323 GO:0045736 GO:0045944 GO:0048514 GO:0060173 GO:0060674 GO:0060707 GO:0060849 |
Transcript
| Transcript ID | aug_v2a.10255.t2 |
|---|---|
| Definition | - |
>aug_v2a.10255.t2 gtcctcgctacggcggccgactacgacctacatatgccacttagctgcgagagaaaacggattttgagttgagtaagtga atgtgtgcagcataaactttccaatgcagccatgaataatatctgtcttgtattaatccttcgcccttgatgaagcgagc gatcgcggaaacgttatccaatcgtgctcgcgcgctcttgaaacaacgctaactgttggactgtaattaaatccacagtc ttaatttgccgggtggtatggccggggtccccgctcaatcgtggtgcacagaaaagacagagcccttagaagagtcggca gagaaaaatgtgcagcaagtggaatgtgccgtatgcggcgacaaatcatcgggcaaacattatggagtattcacctgtga aggatgtaaatctttcttcaaacggagtgttcgccgtaacctcagctacacttgccgagcttcacgaaattgcccaattg atcagcatcaccgaaatcagtgtcagtattgccggcttagaaaatgcatgaaagtcggaatgagacgcgagggtacgggt gagaaattatcatttaacaaattacaaatccgtttggctcactttgaccgctgataaatcgtaagtattcattgcaagtg catgagtagtatgttgaatgaaccttttcaccttttccgacagccgttcaaagaggtcgaatccctccaacacaagtacc gcaaccgagtcctcaacactccgcgttaaacggtaatgatgtttcaaatggtcactcatttctgtcgggctttatcagcc ttttgctgcgagcagagccataccccaccacaagattccaacagggaatgaacatgccgtgtggtataatgggaattgaa aacatctgcgagttagccgcgcggttgttgttcagtgcagttgaatgggctcgcaacatcccgttcttcccggatctagc tgttactgatcaagtggcgctgctacggttggtttggagtgagttgtttgtactcaacgctgcccaatgtccgatgcctc tacaagttgcaccacttcttgcatccgctggtatccactcgaaccacatgtcaccagacaggatggtcacatttatggat aacgtaagaatatttcaagagcagatcgagaagtaccgaaatctacatgtggatgccgcagaatttgcttgcctcaaggc tatcgtgttgtttacgtcaggtaagcctgtgcaaaagactttttcaaaccgagagacgataagtgcttggtgaatgtgga aagttttattattttattgataactctctgagggcattgacggcattttatcggtgtgggaaattaatagtaatgcaaaa gtgaagtcaagggtgtgtgttcttccccgcctccgagtaaccgacctgcttaagatcgatcgcattcgcagcaatgtcac aaagtgtaactttattttaacagatgcgtccggtctcactgacccccagtacatcgagagtctacaggaaaagacccagt gcgctctagaggagtataccagaaatcaatatcccaatcaaccaacacgctttggaaaacttctcctgaggctgccgtcg ttacgaagcatcaattcttccattgtggaacagcttttctttgtacgtctcgttggcaagaccccaatcgacacactgct tagagatatgttattgtccggaacaccaaccagttggccctacctgccttgctcttagagcagggggaacgatgaagctc aggcgagcccctcggcgcaaacctcctaaaactcatgcactcgttcttcaaaagaacattaaacgttttgtcttaagcag aatttgttaaaaatatatacaggctccaggccttaaaaccttctatttcccttctaatacatactagttaggcattaata acgaattttggttgcatttgaagacacctttagtattttatatctgttgcagagatgaagaatggaacgaagtgaaacaa attagtgactgcctttgtatcggtgatagtgttttatgtaaatagggttcggcttagacgctcagacaagcttttcataa agctcgttgtaagatagaagttgtatagtatagatatttttactacttcttaggattaaaccagtagcttagctatgtgt taaagtatttttttcattagctcaacttcaagttgaagcatttgttttggtgagtcgatgtgtgtcttggccaacaagaa catggccactcgtgtcagttgctgaaagcaatagtgtgataactcgttctcctcgtgtgttttgaaaagatttatgtcta agacatgaccatattaaatgatacgaaattaaaaactcattttaatagcttcgaggtcttagtattttagtatgttttag gtatgcaacagattaatattaaagtcacggtgttatttagtttgggggcgtcctaggtcaagatatatctcctctccagt aaataacagaaacaaat |
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| Transcript ID | aug_v2a.10255.t1 |
| Definition | - |
>aug_v2a.10255.t1 gtcctcgctacggcggccgactacgacctacatatgccacttagctgcgagagaaaacggattttgagttgagtaagtga atgtgtgcagcataaactttccaatgcagccatgaataatatctgtcttgtattaatccttcgcccttgatgaagcgagc gatcgcggaaacgttatccaatcgtgctcgcgcgctcttgaaacaacgctaactgttggactgtaattaaatccacagtc ttaatttgccgggtggtatggccggggtccccgctcaatcgtggtgcacagaaaagacagagcccttagaagagtcggca gagaaaaatgtgcagcaagtggaatgtgccgtatgcggcgacaaatcatcgggcaaacattatggagtattcacctgtga aggatgtaaatctttcttcaaacggagtgttcgccgtaacctcagctacacttgccgagcttcacgaaattgcccaattg atcagcatcaccgaaatcagtgtcagtattgccggcttagaaaatgcatgaaagtcggaatgagacgcgagggtacgggt gagaaattatcatttaacaaattacaaatccgtttggctcactttgaccgctgataaatcgtaagtattcattgcaagtg catgagtagtatgttgaatgaaccttttcaccttttccgacagccgttcaaagaggtcgaatccctccaacacaagtacc gcaaccgagtcctcaacactccgcgttaaacggtaatgatgtttcaaatggtcactcatttctgtcgggctttatcagcc ttttgctgcgagcagagccataccccaccacaagattccaacagggaatgaacatgccgtgtggtataatgggaattgaa aacatctgcgagttagccgcgcggttgttgttcagtgcagttgaatgggctcgcaacatcccgttcttcccggatctagc tgttactgatcaagtggcgctgctacggttggtttggagtgagttgtttgtactcaacgctgcccaatgtccgatgcctc tacaagttgcaccacttcttgcatccgctggtatccactcgaaccacatgtcaccagacaggatggtcacatttatggat aacgtaagaatatttcaagagcagatcgagaagtaccgaaatctacatgtggatgccgcagaatttgcttgcctcaaggc tatcgtgttgtttacgtcaggtaagcctgtgcaaaagactttttcaaaccgagagacgataagtgcttggtgaatgtgga aagttttattattttattgataactctctgagggcattgacggcattttatcggtgtgggaaattaatagtaatgcaaaa gtgaagtcaagggtgtgtgttcttccccgcctccgagtaaccgacctgcttaagatcgatcgcattcgcagcaatgtcac aaagtgtaactttattttaacagatgcgtccggtctcactgacccccagtacatcgagagtctacaggaaaagacccagt gcgctctagaggagtataccagaaatcaatatcccaatcaaccaacacgctttggaaaacttctcctgaggctgccgtcg ttacgaagcatcaattcttccattgtggaacagcttttctttgtacgtctcgttggcaagaccccaatcgacacactgct tagagatatgttattgtccggaacaccaaccagttggccctacctgccttgctcttagagcagggggaacgatgaagctc aggcgagcccctcggcgcaaacctcctaaaactcatgcactcgttcttcaaaagaacattaaacgttttgtcttaagcag aatttgttaaaaatatatacaggctccaggccttaaaaccttctatttcccttctaatacatactagttaggcattaata acgaattttggttgcatttgaagacacctttagtattttatatctgttgcagagatgaagaatggaacgaagtgaaacaa attagtgactgcctttgtatcggtgatagtgttttatgtaaatagggttcggcttagacgctcagacaagcttttcataa agctcgttgtaagatagaagttgtatagtatagatatttttactacttcttaggattaaaccagtagcttagctatgtgt taaagtatttttttcattagctcaacttcaagttgaagcatttgttttggtgagtcgatgtgtgtcttggccaacaagaa catggccactcgtgtcagttgctgaaagcaatagtgtgataactcgttctcctcgtgtgttttgaaaagatttatgtcta agacatgaccatattaaatgatacgaaattaaaaactcattttaatagcttcgaggtcttagtattttagtatgttttag gtatgcaacagattaatattaaagtcacggtgttatttagtttgggggcgtcctaggtcaagatatatctcctctccagt aaataacagaaacaaat |
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Protein
| Protein ID | aug_v2a.10255.t2 |
|---|---|
| Definition | - |
>aug_v2a.10255.t2 MAGVPAQSWCTEKTEPLEESAEKNVQQVECAVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLSYTCRASRNCPIDQHHRN QCQYCRLRKCMKVGMRREGTAVQRGRIPPTQVPQPSPQHSALNGNDVSNGHSFLSGFISLLLRAEPYPTTRFQQGMNMPC GIMGIENICELAARLLFSAVEWARNIPFFPDLAVTDQVALLRLVWSELFVLNAAQCPMPLQVAPLLASAGIHSNHMSPDR MVTFMDNVRIFQEQIEKYRNLHVDAAEFACLKAIVLFTSDASGLTDPQYIESLQEKTQCALEEYTRNQYPNQPTRFGKLL LRLPSLRSINSSIVEQLFFVRLVGKTPIDTLLRDMLLSGTPTSWPYLPCS* |
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| Protein ID | aug_v2a.10255.t1 |
| Definition | - |
>aug_v2a.10255.t1 MAGVPAQSWCTEKTEPLEESAEKNVQQVECAVCGDKSSGKHYGVFTCEGCKSFFKRSVRRNLSYTCRASRNCPIDQHHRN QCQYCRLRKCMKVGMRREAVQRGRIPPTQVPQPSPQHSALNGNDVSNGHSFLSGFISLLLRAEPYPTTRFQQGMNMPCGI MGIENICELAARLLFSAVEWARNIPFFPDLAVTDQVALLRLVWSELFVLNAAQCPMPLQVAPLLASAGIHSNHMSPDRMV TFMDNVRIFQEQIEKYRNLHVDAAEFACLKAIVLFTSDASGLTDPQYIESLQEKTQCALEEYTRNQYPNQPTRFGKLLLR LPSLRSINSSIVEQLFFVRLVGKTPIDTLLRDMLLSGTPTSWPYLPCS* |
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