Gene
| Gene Model ID | aug_v2a.10247 |
|---|---|
| Locus | scaf3932 : 41802 ... 46635 : - |
| To GenomeBrowser | scaf3932:41802..46635 |
| Genes list of scaffold | scaf3932 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna-directed rna polymerase iii subunit rpc7-like | GO:0000790 GO:0001056 GO:0005666 GO:0006384 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.10247.t1 | gi|163914887|ref|NP_001106442.1| | DNA-directed RNA polymerase III subunit RPC7-like [Xenopus (Silurana) tropicalis] | 4.0e-19 |
| aug_v2a.10247.t1 | gi|602663399|ref|XP_007437331.1| | PREDICTED: DNA-directed RNA polymerase III subunit RPC7-like isoform X1 [Python bivittatus] | 8.0e-19 |
| aug_v2a.10247.t1 | gi|672043514|ref|XP_008759553.1| | PREDICTED: DNA-directed RNA polymerase III subunit RPC7-like isoform X1 [Rattus norvegicus] | 9.0e-19 |
| aug_v2a.10247.t1 | gi|157818569|ref|NP_001103041.1| | DNA-directed RNA polymerase III subunit RPC7-like [Rattus norvegicus] | 1.0e-18 |
| aug_v2a.10247.t1 | gi|148706948|gb|EDL38895.1| | polymerase (RNA) III (DNA directed) polypeptide G like, isoform CRA_a, partial [Mus musculus] | 3.0e-18 |
Transcript
| Transcript ID | aug_v2a.10247.t1 |
|---|---|
| Definition | - |
>aug_v2a.10247.t1 gcggagaagcgcttcctgctgccatactgcaacctcctccactatatccagtaagtgaattcttgttcacgcatcttttt gctaagcatatttatttgtgtttggcgcgaattgcggtagtttacagagtttttaagctccgatcaactcgaaacttcag tatttattttaaattgctcagtgtcggttgagtgcctcaaacagaaacgcacaacctgaacagtaaaatgggggtgtgaa aacataccatattgttttcgctccagcgtatgacaaacacgaatttccaaaattcctatgacagttcagttaccaaaagg aaaaaagaaaaaatcactcagcttattgctatatttcttcctttacagctgttagggcgcttctgtgccaaaaaaaaaat catttgagaccttacactttcagttcaattttccccaccccatcaacacaaaggtgaaattccgcacaccgggaaggctg tacccgacaaattccacactccccaggcacagaaagtagtgccccaggtttgccagggtgggggatgtttaagtttcaat ttgattgtggaattgagaacccacatgaatgtatagctgtgtattgccatatatagctgtgaatatccatgtggagagct cagtatagaataacagtgctaaagtaccgtatataatttatttatattcatgatatgatatgtttccccatacatcaagt actcaccacacccccatccaaacccattttttcaaccaggggccatttgtttggttaagcatggttagcgttaccatttg tttagaagtatcgaaacctatagttttctatggtagttaattaaaaataattagacccgtagcccttttgggctacaggt caatagcccatgaggtgaagctgaatgggctattaacccatggcccttgagggcggaaggtcaaaatattttagtatcac ccaagtagtctgggagaaaaggcgataacaaagttagcaaatgcaagttgaagaagaataatttatttgggaataaaaca aaacaaagccgcatgaatttcacaacttgatgactgttactaatagtactctagagcgcagccaataaaaatacaggatt tgcattagtccagtagttgagtgatactaatgctagttagcatgcttcgagaaagtctggccagaatgctggaccgtttg ctcccatatggatagctgcagctatccgtttggggcaaattgtcaacgtggatgaaagggtacaatgtgcagtgaagctg acatatcagacaataattattgtaaaagtaagcaaaaggtggtatcaaatgaagatatgatccaactgagctatgaagtc acacagtggagagcaggtcaattcgttgggctcatgttttcctgtttgatttnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnaaatgtttgaagcgttcataaaatcagtgtgtattagtgtaacagtcatgagcttattctt ttcggtgtcataatcttacggtcactttcttgctagaaaatcatctctcaaggctagtttaacatttttcttttagcctc ttgatgtgaaacccttaccactgcggcaaacagatgccgacgaatacatgttagcattgaaacaggaattacgggggtgt atgcgagaactaccctacttcataaaaaattcagtggagacaaaaggtgagtatggcaattgactcaactgtctttgttg cacagggaatccaagcacaaaaaaaagtaccaaggatctgaataaacagtacatctgaaactccgtagtttgcatggtag atgctatgggagttgtagattggagtttgtggtgaaatgtcaaaatttttttatctccccttgcatgtcctgagttcttg catcaactcaataagtaccgtaccgcaagaaatgcctgttatcccctaggagtcactcacgagggggctgtctctttcaa tgttaccactgctgttcctggctaattctcacccgggatgcgagtcttaaattagggtgcacaatgccttgttgtttgac tgttttagttgcgtgagcacttgcaagttagcatttcatcattgcttgcaaaagttcgcatttaatttgtagtgcatccc acatagctgctctatcctttgcactctgacaaatatctgtatttcatttatttgtaattgtgtaatattatgactttgtg tatgaacttcagatatcgagagattttctgacaggtacagagaaaaaaaagtggatggacacttggagtggcaaccaggt aacagcttgttgattgaaatgtttatgttcaaactatatctttccaaagaatgctatttgaaggattgataaatcaaccc tttccataaacagtctttgacttgaattcaggcatgaactgggtatgtgactttagtgtttatacatgcttcttagattg gaagttatttccaagtgagctgaagataaaaccaagaaaacagcgcagtcaaatgagcacaagtaagaatgtaaaggtta ctaaaagaaaaaaagcttctaaaggcaatggctgttttactgtcagagaaaaaataagatcaatacacaatcttggatta gtactattacgctaaaataacatcacaagttatacctaatcatagggctaattccctataaccataattcctgattattt gtgcttagtggattgggttcgtcttacaagatattgagtgaaatctaatacaattactttttttttatgtcagagccaag aattccaaaacaaactgaaaggaacaaagcatttataagcacagaagccttgaagcagcttgatgtatgatactgttgtc cctttttgcctgtttgtgttcactgtcttcatgattagtttgtctttggataacaagactgttccttgtgtttatttatt ggccaacgccatttttatcctcctctctgtgtagttgacctatcccttacatacaagtcagtgcaaagggttttatgcta cacactccagaaactgattttttggggataacttttctcagtttattctatcacttctatttatgtgaattagaatgcac aggttttcttcgaggaaaaggggtggggtcctcacataggccatagttaaagggacatagcttttgatgatgttgctgtt taaccctttacctcccaaggggttccccattgacaagtaaaatcgtctggcgttagacagtaaaatctataagtgccaat tggcactcatgggagggaaagggttaaacagtagaagtaaactgctctcaacaaaataatgtgttttagttctcatgagc tgaaacagaataggatttagtcatctccctttttaccagcataacaggtaaagctagagtttttcaaattggtagagcac tcgtgggcatcattgtaacagttataactatgtctactcagttcattttgtggaatagaaatttgccatcatcatttcag tgatacagttggttttgctcttacttctttattaatacaaggatcagatttagtattaaaacaaatgtacatgatttttt tttctttcccctttgacaattccaggctattttaggtagtaataagtgagacagctaatttttcaggttatcgcctgaag cagaacatcaagaatgcatattttaccaatagttgcttgatgcttaaattaggaaatggcnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnntacattttggcattcacacatatttttatgcaatactggtagaccttgttaaaaaaattaataaatgcaagat aatatcaggtaagtaataattgtaacttgcaaga |
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Protein
| Protein ID | aug_v2a.10247.t1 |
|---|---|
| Definition | - |
>aug_v2a.10247.t1 MLALKQELRGCMRELPYFIKNSVETKDIERFSDRYREKKVDGHLEWQPDWKLFPSELKIKPRKQRSQMSTKPRIPKQTER NKAFISTEALKQLDV* |
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